Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0068 |
Symbol | |
ID | 6114290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 83377 |
End bp | 84135 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641631548 |
Product | 3-deoxy-D-manno-octulosonic-acid kinase |
Protein accession | YP_001758464 |
Protein GI | 170724438 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000292755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAATAG CCTCACCTGT GACAACGCCA ACTGAGATGC AGATAATCAG CTCTCCTCAA GGAGCGATCG CTGTTTGTCA CCCCACGCCA GATACCATCT CCAGCAACTG GTTTACCATG GAGTATTGGC AACAAAAATC GGCGATAACG GGTTCATCAA AAGGGCGTTA CACCACTTGG TTTGTGAAAC CAGACCTAAG TGAAGGGGAT GATAGCCAGT GGGTACTTCG TCACTACTAC CGTGGTGGGC TAATGGAGAA GCTGAGTAAG GATAGTTACC TATACACAGG GCTTCACAAG ACTCGCGCAG TGGCCGAGCT TGCCCTGCTT GTACAGCTCT ATAATGAAGG TTTTCCCGTA CCTAAACCTG TAGCGGCCAA TGTTGAGCGA CATGGCCTGC ACTACCGCGC CGATATCATT ATCGAGCGTG TCGAAGGTGC ACAAGATCTG GTGGCTAAAT TAAGTAAGTC CCCTATGTCT GACAGCCAAT GGCAGCAACT GGGTAGCGGT ATCGCTCAGT TCCACCAGCG CGGTGTTTAT CATGCCGACC TTAATGCCAA GAATATTCTC ATCACTGACG ATAAATTCTA TCTTATCGAT TTCGACAGAG GCGAGATCCG CCAGCCCTCA ACTAAGTGGC AAACTGCCAA TTTAGAGAGG CTACAGCGCT CCTTCAATAA GGAGAAAGGG ATCCTCAGCT CACTACACTT TACTCAAGAA AACTGGCAAG CCTTGATGGT GGGTTACTCA AAAGGTTAG
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Protein sequence | MPIASPVTTP TEMQIISSPQ GAIAVCHPTP DTISSNWFTM EYWQQKSAIT GSSKGRYTTW FVKPDLSEGD DSQWVLRHYY RGGLMEKLSK DSYLYTGLHK TRAVAELALL VQLYNEGFPV PKPVAANVER HGLHYRADII IERVEGAQDL VAKLSKSPMS DSQWQQLGSG IAQFHQRGVY HADLNAKNIL ITDDKFYLID FDRGEIRQPS TKWQTANLER LQRSFNKEKG ILSSLHFTQE NWQALMVGYS KG
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