Gene Swoo_0065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0065 
Symbol 
ID6114287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp79134 
End bp80327 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content47% 
IMG OID641631545 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_001758461 
Protein GI170724435 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000130332 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000319123 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAAAGA CCTCATTCTA CGATCAAATT AATCAACAAC TTACCCAAGT AAAAGCGGAA 
GGCTTATACA AGAGTGAGCG TATTATCGTC TCTCCTCAGC AGACTGAAAT TCAGGTAAAT
GGTGCTGAAG TGATGAACTT CTGTGCCAAT AACTACCTTG GCTTAGCTAA CCATCCTGAG
TTAGTTAAAG CAGCACAAGG TGGCTTAAAC GATCATGGTT TCGGTATGGC TTCAGTACGT
TTTATCTGTG GTACTCAAGA TATTCATAAG CAGCTTGAAG CAAGTCTTAG CGAATTTTTA
GGCATGGAAA ACACCATTCT CTACTCTTCA TGCTTCGATG CTAATGCTGG TCTGTTCGAA
ACCTTATTAG GCCCAGAAGA TGCCATCATC TCAGATGCGT TAAACCACGC GTCGATTATC
GATGGCGTAC GTTTATGTAA AGCTAAGCGT TTCCGTTACG CCAACAATGA TATGGCTGAG
CTTGAAGCCC AGCTAAAAGC GGCGAAAGAA GCTGGCGCAC GCAACATAAT GATCGCTACC
GATGGCGTAT TCTCTATGGA TGGCGTTATC GCTAACCTCA ATGGTGTATG CGATCTTGCT
GATCAGTATG GCGCACTTGT GATGGTCGAT GACTCTCACG CCGTCGGTTT CGTTGGCCAA
AATGGCCGCG GTACCCACGA ACATTGCCAA GTGATGGACC GCGTTGACAT TATTACTGGA
ACACTGGGTA AAGCACTCGG CGGTGCCTCA GGTGGATTCA CTTCGGCTAA AAAAGAGGTT
GTCGACTGGT TACGTCAACG CTCACGCCCT TACCTATTCT CCAACTCATT AGCACCTTCG
ATCGTCACCG CATCTATCCA TGTACTTGAG ATGCTAAAGT CGGGTCAGGC TCTGCGTGAA
GCTGTATGGG AAAACAGCCG CTACTTCCGT GAAAAGATGA CAGAAGCAGG CTTTACTTTA
GGTGGTGCAG ACCATGCGAT TATTCCGGTA ATGATCGGTG ATGCAAAACT TGCCGGTGAT
TTTGCCAGCA GATTACTTGA AGAGAATATC TATGTTATCG GTTTCTCGTT CCCAGTAGTA
CCTAAAGGTC AGGCACGTAT TCGCACTCAG ATGTCAGCGG CGCACACTAA AGCGCAGCTA
GATAAAGCTA TCGAGGCATT TACTCGTATC GCCAAAGAGA TGGGCATCAT ATAG
 
Protein sequence
MAKTSFYDQI NQQLTQVKAE GLYKSERIIV SPQQTEIQVN GAEVMNFCAN NYLGLANHPE 
LVKAAQGGLN DHGFGMASVR FICGTQDIHK QLEASLSEFL GMENTILYSS CFDANAGLFE
TLLGPEDAII SDALNHASII DGVRLCKAKR FRYANNDMAE LEAQLKAAKE AGARNIMIAT
DGVFSMDGVI ANLNGVCDLA DQYGALVMVD DSHAVGFVGQ NGRGTHEHCQ VMDRVDIITG
TLGKALGGAS GGFTSAKKEV VDWLRQRSRP YLFSNSLAPS IVTASIHVLE MLKSGQALRE
AVWENSRYFR EKMTEAGFTL GGADHAIIPV MIGDAKLAGD FASRLLEENI YVIGFSFPVV
PKGQARIRTQ MSAAHTKAQL DKAIEAFTRI AKEMGII