| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0061 |
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| Symbol | |
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| ID | 6114283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 76061 |
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| End bp | 76714 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641631541 |
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| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
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| Protein accession | YP_001758457 |
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| Protein GI | 170724431 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000549643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000031605 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TAGCAGTGCT TCTGAGTGGG GCTGGTGTTT TCGATGGTAG CGAGATCCAT
GAGTCTGTTT TAGCTATGTT AGCGCTGGAT AAGTTAGGTG CAGAGTATCA ATGTTTTGCT
CCTAATATTA ATCAGATGCA TGTGGTTAAT CATTTAACTG GTGAGGTTGA AGCTGGCGAG
CAGCGTAATG TATTGATTGA GTCAGCGCGC ATCGCTCGTG GAGAGGTAAA GGCCACCGAT
GAGTTGGATA TCGCTATTTT TGATGGGTTG ATCATCCCAG GTGGGTTTGG TGCGGCAAAA
AATCTGTGTA ACTTTGCAAC CAATGGCAGT GACTGTGAAG TTTCGCCAGA AGTAAGTGTA
TTTATTCGTG AGTTTGTTGA GGCTAGTAAA CCAGTTGGAT TTATCTGTAT CGCACCGATT
ATGATCCCAA GGCTGTATGG TGAAGGTGTT AACGGCACCA TAGGCTCAGA TCTCGAGACG
GCACAAGCGT TTAATTTAAT GGGTGGCATA CATCAGGCAG CAGAGGTTCA AGAGATTATT
GTCGACGAAG AGAGAAAAGT GGTGAGTACG CCAGCTTATA TGTTGGCTGG CAGCATCTCG
GAGGCGAATA TCGGCATTGA GAAGCTAGTT AAAAAGGTGC TAGAACTGGT TTAA
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| Protein sequence | MKKIAVLLSG AGVFDGSEIH ESVLAMLALD KLGAEYQCFA PNINQMHVVN HLTGEVEAGE
QRNVLIESAR IARGEVKATD ELDIAIFDGL IIPGGFGAAK NLCNFATNGS DCEVSPEVSV
FIREFVEASK PVGFICIAPI MIPRLYGEGV NGTIGSDLET AQAFNLMGGI HQAAEVQEII
VDEERKVVST PAYMLAGSIS EANIGIEKLV KKVLELV
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