Gene Swoo_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0056 
Symbol 
ID6114277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp67341 
End bp68003 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content44% 
IMG OID641631535 
Producthypothetical protein 
Protein accessionYP_001758452 
Protein GI170724426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.425414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0220256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGAT GTCCCCTTTG CCACAACACT GATACCTCTC TATTTCACCG CAACAAAAAA 
CGCGACATGT ATACATGCAG CCACTGCCAG TTAATTTTTT CCGATGCGAC CTCTCACCTT
CCCCCTCAAG TTGAGAAGAA TAGATATCTT GAAAGCAACA GAAAGAAGCA GGCTGCACTG
ACTCAATTTC TAATCAGTTT AATTGCGCAA TGTGAACAAG GTTCATCAGC ACCACTATCC
GGCCTTAACT TTGGCCGAGT GTTAGACTCA AGCTCACTTT CAAGTACGGG ACTACATCAG
CACCATATTG AACAATATGA TCCCTTCTTT GCACCCGATC ACCACCTATT AAAGCAGCAT
TATGACTATA TTTGCTGCTA CAAAGTATTT GAACATTTCC GCTTTCCTTT TAAAGAGTGG
TCTCTGCTAG GCACCATGCT CAAACCTGGA GGCTGGCTCG CCATTAGCAC CAAATTACTC
ACAGATATCC ACTCTTTCGA TAAATGGCAC CACAAGAACA ACCTGACCCA TGTCAGCTTT
TATCAACGCT CAACTTTCGA GTATCTAGCC GAGCAGGCGG GTTTTAAGCT ATTATTCGCA
GCAAATGATC TCATTTTGGT GCAAAAACCA TCAGGATCTG ATATAACACG CGGCCAAAGT
TAG
 
Protein sequence
MHRCPLCHNT DTSLFHRNKK RDMYTCSHCQ LIFSDATSHL PPQVEKNRYL ESNRKKQAAL 
TQFLISLIAQ CEQGSSAPLS GLNFGRVLDS SSLSSTGLHQ HHIEQYDPFF APDHHLLKQH
YDYICCYKVF EHFRFPFKEW SLLGTMLKPG GWLAISTKLL TDIHSFDKWH HKNNLTHVSF
YQRSTFEYLA EQAGFKLLFA ANDLILVQKP SGSDITRGQS