Gene Swoo_0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0054 
Symbol 
ID6114275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp66211 
End bp66678 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content46% 
IMG OID641631533 
Producthypothetical protein 
Protein accessionYP_001758450 
Protein GI170724424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.806166 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.044221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG TACTGCTTAT ACTCGGTTTT ATCATCGTAG CTTCTCTAGC CTGCTACGCC 
ACCATATTAA TACTCAAACT ACGTAAGCAG ACTGCCGATA GACTAGCAAA ACAGGCTGAG
CTAGATGCCG CCCATAAAGC TAAACTCGAA GAGCACTTAG ATAGTATCCG TTATATCGCC
ACCGCGATGT TGGAGGATAG GTGTGAGCTA TCTGAAGGTG TGATGAGAAT TGCCAACTTA
TTCAATATTA TCTCGCTATC TGAGCAGGTG GCCAACGATT ACCCAGCTAT CTTTAAACAC
TTTGCCGTGA TTGAGTCTCA CCCCATTATG GCCGAGCGTA AGCAGCTTGA GAAAAGAGCC
CGCATGAAGC TCGACTATGC TCGTATGCGC TCAGAAGCCG AATTAGAGAC AGAAATTTTG
CAAGAAGCTA AGCAGCTCAC CACGTTTACC CCTACTCCTT TGCATTAA
 
Protein sequence
MTTVLLILGF IIVASLACYA TILILKLRKQ TADRLAKQAE LDAAHKAKLE EHLDSIRYIA 
TAMLEDRCEL SEGVMRIANL FNIISLSEQV ANDYPAIFKH FAVIESHPIM AERKQLEKRA
RMKLDYARMR SEAELETEIL QEAKQLTTFT PTPLH