Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0053 |
Symbol | |
ID | 6114274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 64613 |
End bp | 65953 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631532 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001758449 |
Protein GI | 170724423 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.59946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.060899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA AATACAATTA CAGCGGTCCC CGTTATACGT CATACCCTAC GGCATTGGAA TTTGATGACT CTTTTACTGA AGAGAAGCTA CTCACTTCCA TTGCAAACAG CAAAAGCGAT AAGTTATCTC TTTATCTGCA TATCCCTTTC TGCGCTAAGC TTTGCTACTA CTGCGGCTGT AATAAGGTGA TCACTCGTCA CCAACATAAA GCCGATCAAT ATATCGAATA CCTAGCTGCT GAAATCGTTA AACGTGCTCC GCTGTTTAAG AACTACCTTG TAACTCAAAT TCACTGGGGT GGCGGTACAC CGACCTTTTT AAGCCCAGAT CAGATCCTAA AGCTCTCTTC ACTTATCAAA GAGCACTTCA ATGTCGCTGA TAAAGGCGAA TACTCTATCG AAGTGGATCC ACGTGAGATT GAGCTCTCTA TGCTTGATAC GCTTAAAGAA GCGGGCTTTA ACCGCATCTC TATCGGTGTA CAAGACTTCA ATAAAAAGGT TCAAATCGCG GTAAACCGTG AGCAAGATGA GCAGTTCATC TTTGACCTGA TGGCCAGAGC AAAAGAGCTA GGCTTTGTTT CAACAAACAT TGACCTTATC TATGGCCTGC CACACCAGAC ACCTGAGACT TTCGCAGAGA CAATGCAGCG CGTGCTAGAT CTCGACCCAG ATCGTTTATC TGTCTTTAAC TACGCACATC TGCCTGCCCG TTTTGCAGCT CAGCGTAAGA TTAAAGATGA AGATCTAGCA TCACCTCAGC AGAAGCTAGA TATGCTCCAC CAGACTATCG AAACCTTAAC GGGTGCAGGG TACCAATACA TAGGTATGGA TCACTTTGCT AAGCCAGATG ATGAACTGTC GATTCTGCAA AATGAAGGTC GTCTGCACAG AAACTTCCAA GGTTATACCA CTCAAGAGGA GTGCGACCTA TTGGGACTGG GTGTATCATC AATCAGCCAG ATCGGTGACT GTTACGCTCA AAACCAAAAA GACATTCGCC CTTACTATGA GTCAGTAGAT AAGTTAGGTC ATGCATTGTG GAAAGGCTGT AGCTTAAACC GTGACGATGA GATCCGTCGT GTGGTGATTA AGCAGCTTAT CTGTCATTTT GACCTTGATA TGGCTCAAAT CGATGAGAAA CTAGGTATTA ACTTTGAAGA GTACTTCAGT GAAGACCTTA AACTACTGCA AACCTTTATC GATGATAAGC TAGTCGACAT CACAGACAGA AAGATCACCA TCAGCCCTAC TGGCCGTTTG TTGATCCGTA ATATCTGTAT CTGTTTTGAT GTTTACTACC GTGAAAAGGC AAGACAGCAG CAATTCTCTC GCGTTATTTA A
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Protein sequence | MIEKYNYSGP RYTSYPTALE FDDSFTEEKL LTSIANSKSD KLSLYLHIPF CAKLCYYCGC NKVITRHQHK ADQYIEYLAA EIVKRAPLFK NYLVTQIHWG GGTPTFLSPD QILKLSSLIK EHFNVADKGE YSIEVDPREI ELSMLDTLKE AGFNRISIGV QDFNKKVQIA VNREQDEQFI FDLMARAKEL GFVSTNIDLI YGLPHQTPET FAETMQRVLD LDPDRLSVFN YAHLPARFAA QRKIKDEDLA SPQQKLDMLH QTIETLTGAG YQYIGMDHFA KPDDELSILQ NEGRLHRNFQ GYTTQEECDL LGLGVSSISQ IGDCYAQNQK DIRPYYESVD KLGHALWKGC SLNRDDEIRR VVIKQLICHF DLDMAQIDEK LGINFEEYFS EDLKLLQTFI DDKLVDITDR KITISPTGRL LIRNICICFD VYYREKARQQ QFSRVI
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