Gene Swoo_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0049 
Symbol 
ID6114266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp52029 
End bp52571 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content45% 
IMG OID641631524 
Productcarbonic anhydrase 
Protein accessionYP_001758445 
Protein GI170724419 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00044877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.156503 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAGCT CACTCAGATC TTATAAGGGA GTCACTCCTA CTCTTCATCA AGATGTCTAT 
ATCGATGAGG CTTGTGTGCT CGTAGGAGAC ATTGATCTTG ATGACGATTC GAGTATTTGG
CCTTTGGTTG CCGCGCGAGG TGATGTCAAC CATATGAAGA TAGGCAAACG AACCAATGTA
CAAGATGGCA CAATTCTTCA TGTCACCCGC AAGTCAGCCT CCAACCCCAA TGGTCACCCA
CTTTTAATTG GTGATGATGT CACTGTTGGC CATAAGGCGA TGCTACATGG TTGCACTGTT
GGTAATCGTA TTTTAATTGG AATGGGAGCC ATCATATTAG ATGGTGCGAT AGTGGAGGAT
GATGTGATCT TAGGCGCAGG ATCGCTCGTT CCACCAAATA AGGTATTAAA GAGCGGGTTT
CTCTACGTTG GCAGCCCAGC TAAACAGATC CGCCCCTTGA CTGAAGCTGA ACTCAAGTTC
CTACCTGAGT CGGCAGAAAA CTATGTCAGA TTGAAAAACG AGTATTTACA AGAAAGCGTT
TAA
 
Protein sequence
MSSSLRSYKG VTPTLHQDVY IDEACVLVGD IDLDDDSSIW PLVAARGDVN HMKIGKRTNV 
QDGTILHVTR KSASNPNGHP LLIGDDVTVG HKAMLHGCTV GNRILIGMGA IILDGAIVED
DVILGAGSLV PPNKVLKSGF LYVGSPAKQI RPLTEAELKF LPESAENYVR LKNEYLQESV