| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0040 |
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| Symbol | |
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| ID | 6114257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 44539 |
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| End bp | 45534 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631515 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_001758436 |
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| Protein GI | 170724410 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.529295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGCGC ATGAAAAGTC AGCGCTTCCT CTGCCGGAGA GTCTACTTGA GCGTGAGCTT
GCCCCTAATC TTAATTTAGT TGAATCGGCT TTAGCGTGGC AGGAGTCTGC TGATAACCAC
GCCATTATCT GTTTCGACGA TCCACACTAC CCTAGTTTTT TAAAGCAGAT ATCTGCTCCT
CCCCCCATCT TGTTTGTCAA AGGTGAACTG GATGCATTTT TTCCTCCGGC ACTGGCAATT
GTTGGCAGCC GAGCAGCGTC AAAAGCGGGT TTACAGCTTG CTTATCGGTT TGGGAGTGAG
TTGGGTGAGC TAGGGTTCGG TGTTTGTAGT GGAATGGCTG TAGGCGTTGA TGGTTCAGCA
CATCAGGGTT GCCTCGATAG TGGTGGTAAA ACTCTGGCAG TGTTGGGTAC GGGAGTTGAT
GTCATCTACC CTAAGCGGCA TCGAAAAATC TATGAGGATA TTCAGGCTCA TGGTGCAATT
GTGAGTGAAT TTTGGCCTGG CACTAAGCCC TTTTCGGGGA ATTTTCCGAA ACGAAATCGA
ATTATCAGCG GTCTATCTAT AGGAACCTTA GTGGTTGAAG CCTGCAGGAA AAGTGGTTCA
TTAATAACTG CCAGATTGGC CCTAGAGCAG GGGAGAGAAG TTTTTGCTAT TCCTGGTAGT
GTCTTGGCAG AAAATAACCA AGGCTGCCAT GATTTGATTA AAGATGGAGC CAAACTTGTC
GAGAATGTGG CCGATATAAT AGAAGAAGTA TCAGCTTTAT GTGATTTTCA CCTTGAAGAA
CTGAAAAGCA GTCACCATAT AGGGGAAGAG AACGCTTCTG ATTTGCCATT TGCCTCACTG
TTAGCTAGTG TTGGATATGA GACTACACCA ATTGATGTTG TGGTTGAGCA TAGTGGAAAG
GCCATAGAGT TAGTATTAGA GCAAATGCTT GAACTTGAGT TGCAAGGTTG GGTCGCTGTA
GTACCCGGTG GTTATGTAAG AATAAAGAGG AGCTAG
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| Protein sequence | MLAHEKSALP LPESLLEREL APNLNLVESA LAWQESADNH AIICFDDPHY PSFLKQISAP
PPILFVKGEL DAFFPPALAI VGSRAASKAG LQLAYRFGSE LGELGFGVCS GMAVGVDGSA
HQGCLDSGGK TLAVLGTGVD VIYPKRHRKI YEDIQAHGAI VSEFWPGTKP FSGNFPKRNR
IISGLSIGTL VVEACRKSGS LITARLALEQ GREVFAIPGS VLAENNQGCH DLIKDGAKLV
ENVADIIEEV SALCDFHLEE LKSSHHIGEE NASDLPFASL LASVGYETTP IDVVVEHSGK
AIELVLEQML ELELQGWVAV VPGGYVRIKR S
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