Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0037 |
Symbol | |
ID | 6114254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 41639 |
End bp | 42601 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631512 |
Product | methionyl-tRNA formyltransferase |
Protein accession | YP_001758433 |
Protein GI | 170724407 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0223] Methionyl-tRNA formyltransferase |
TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.553222 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCAT TAAACGTTAT TTTTGCGGGT ACACCAGATT TTGCAGCTCG CCACCTTCAA GCTCTTATCA ACTCTGAACA TAATGTTATC GCCGTATACT CCAGAGCAGA TAAACCTGCT GGACGCGGTA AAAAGTTACA GGCCAGCCCG GTAAAAATGT TGGCGCTGGA AAATGAGATC CCGGTATATC AACCTACCTC CTTAAGGGAT GAGCAAGCGC AAGCAGAACT GGCCAGTTTA AATGCCGATA TCATGGTTGT TGTAGCTTAT GGGTTGATCT TACCTAAAGT CGTGCTTGAT ACACCAAAAC TTGGCTGTAT TAATGTACAT GGCTCAATCT TACCGCGCTG GCGCGGTGCA GCACCTATCC AACGAGCACT TTGGTCTGGT GACACAGAAA CTGGCGTTAC CATAATGCAG ATGGATATCG GCCTAGATAC TGGTGATATG CTGCTAAAAA CTCAGTTGCC AATCGAAGAT AGCGATACTT CAGCCAGCTT ATATGAAAAA CTGGCCGAAC AGGGACCAGA AGCACTGGTC GAAGCCTTGA CGGGACTCGC CAAAGGTGAA CTGGCTGCAG AAAAGCAGGA TGAAGCACTG GCAAACTATG CCGAGAAGCT AAGTAAAGAG GAAGCGGAGC TGGATTGGAA TAAGTCTGCA GCTCAACTTT GGCGTGAGAT CAGAGCCTTT AACCCTTGGC CTATTAGCCA CTTTTCTCAC CAAGATGCCA GCATCAAGGT AAGAGAAGCC CACGTCAGCC AATCTAAGTC ACAGGCTCCA GCAGGCACAA TTATCTCGGC AGGCAAAGAG GGCATAGAGA TAGCCACTGG TGACGGTGTA CTGACCTTGC TTAATATGCA GTTACCGGGC AAGAAACCAC TGAGTGTTGC AGATATTCTC AACTCCCGTA GCGAGTGGTT TACCCCTGGC ACAGTTTTAA ACAGCACAAA AGAGGCTGAG TAA
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Protein sequence | MKPLNVIFAG TPDFAARHLQ ALINSEHNVI AVYSRADKPA GRGKKLQASP VKMLALENEI PVYQPTSLRD EQAQAELASL NADIMVVVAY GLILPKVVLD TPKLGCINVH GSILPRWRGA APIQRALWSG DTETGVTIMQ MDIGLDTGDM LLKTQLPIED SDTSASLYEK LAEQGPEALV EALTGLAKGE LAAEKQDEAL ANYAEKLSKE EAELDWNKSA AQLWREIRAF NPWPISHFSH QDASIKVREA HVSQSKSQAP AGTIISAGKE GIEIATGDGV LTLLNMQLPG KKPLSVADIL NSRSEWFTPG TVLNSTKEAE
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