| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0034 |
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| Symbol | |
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| ID | 6114251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 37445 |
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| End bp | 38887 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631509 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_001758430 |
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| Protein GI | 170724404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0561968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAACC TTCGACCTCT GCTATTTATT TTAGGCATTT TTCTGTCGAC ACTGACAGTC
TTTATGTTTA TCCCACTTAT CTTCGCCCTC TTCTATGGCG AAGAGACTGT GGGTGCATTT
ATGATCTCCT CCCTATTTAC TGGTACCTGT GCCAGTGCGT GCATACATCA GGGACGAAGT
AGAAACCTGC ACCTCAATAT TCGAGATATG TTTCTACTAA CCAGCTTAAC TTGGCTGATC
GTCAGCTTCT TTGCCGCCAT GCCCTTTACC TTGTATCACG GCATCAACTA TACCGATGCA
TTTTTCGAGA CCATGTCGGG GATCACCACC ACAGGCTCAA CGGTTCTATC TGGTCTAGAT
TCAATGGATC ACAGTATTCT GATCTGGCGC TCTCTACTGC AGTGGATGGG GGGAATTGGC
TTTATCGTGA TGGCTGTGGC TGTACTGCCC TTCCTCAATG TCGGTGGTAT GAGGCTATTT
AGAACCGAGT CTTCAGACTG GAGCGATAAA GCGATCCCCA GAACGCAAGA TATGGCGAAA
CACCTTTTCT ATATCTACAT CCTCCTCACT GTACTGTGTG GGATTGCCTA TCATCTGTCG
GGAATGAACT GGTTCCAAGC CATTAATCAC GCCATGACCA CGCTCTCTAC TGGCGGTTAC
TCCACCTCAG ACAGCTCAAT GGCGGCATTC TCAAATCAAG CTCACTGGGT TGGCGTGGTA
TTTATGGCAG CTGGCGGATT GCCGCTGTTA ATGTTCGTTA ACAGCATTCA GCAACGCTCA
CTCTGGGTGT GGAATGATGC ACAAGTTAAA GGCTTTATCC TGTTTATCTC ATTGGTATCA
ATGAGCTTAG CCTTCTGGCT CTGGCTAGGT CATGAGATGA GCCCACTCGA TGCCCTTAGA
CTCGCCAGTT TCAATGTCGT GTCAGTTGTT ACCACCACAG GTTATGGTCT CACGGACTAC
ACAGCCTGGG GCGCACTGGC CAATATCGCC TTCCTCTTCT TAATGTTCGC TGGCAGCTGC
TCAGGCTCGA CCTCAGGCGG GATAAAAATT TTCCGCTTCC AGATAGCCGG CGCCATCATG
CGAGAGCAGT TAAAGCAACA GTTTCACCCC AGCGGTGTGT TTAAAGAGCG CTACAATAAC
CGAATCATCA GCGACGATAT TGTCCGCTCT CTGGTGACCT TTATCTTGTT GTTTGCGTTC
GTTATCGTAT TGCTATCAAT CATACTGGTA TTAACTGGAC TCGATCCAAT GACCAGCTTT
ACTGGTGCGA TCACAGCAGT CACCAACGTA GGTCCAGGAC TTGGTGACGT TATTGGCCCG
GCAGGAAACT TCTCTACCCT ACCAGATGTG GCCAAATGGG CACTTGCCAT CGGTATGCTT
TTGGGACGCT TAGAGATACT GACCGTGGCA GTGCTCTTCC ATCCCAGCTT TTGGAAATAT
TAG
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| Protein sequence | MLNLRPLLFI LGIFLSTLTV FMFIPLIFAL FYGEETVGAF MISSLFTGTC ASACIHQGRS
RNLHLNIRDM FLLTSLTWLI VSFFAAMPFT LYHGINYTDA FFETMSGITT TGSTVLSGLD
SMDHSILIWR SLLQWMGGIG FIVMAVAVLP FLNVGGMRLF RTESSDWSDK AIPRTQDMAK
HLFYIYILLT VLCGIAYHLS GMNWFQAINH AMTTLSTGGY STSDSSMAAF SNQAHWVGVV
FMAAGGLPLL MFVNSIQQRS LWVWNDAQVK GFILFISLVS MSLAFWLWLG HEMSPLDALR
LASFNVVSVV TTTGYGLTDY TAWGALANIA FLFLMFAGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQFHP SGVFKERYNN RIISDDIVRS LVTFILLFAF VIVLLSIILV LTGLDPMTSF
TGAITAVTNV GPGLGDVIGP AGNFSTLPDV AKWALAIGML LGRLEILTVA VLFHPSFWKY
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