Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0010 |
Symbol | |
ID | 6114227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 13648 |
End bp | 14328 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641631485 |
Product | allophanate hydrolase subunit 1 |
Protein accession | YP_001758406 |
Protein GI | 170724380 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2049] Allophanate hydrolase subunit 1 |
TIGRFAM ID | [TIGR00370] conserved hypothetical protein TIGR00370 |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000602904 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAATA CCAGCCCTAA GGTATATCGC TTAGGGGAGA GGGCAATCGT ACTCGACTGC AGCGAACTTT TCCCAGCACT CTCAAAGCTA ACCATTCAGA GCAGGATCTG GGAATTGGCT CAAAAGTGCA GAGAGGACAA CACTTTTACC GATCTTGTCC CTGGGATGAA TAACCTGACC CTATTTATTA AAGATGCCAA TCAACTGACA GACTGGATTG CGAGGCTGCC AGAGCTTTGG AGAGATACCA CAGGCATAGA GCTTGATAAC CCAAGCATAG AGATCCCTGT CGTTTACGGT GGAAAATATG GGCCAGATCT CGACGAAGTT GCCAGAGTCC ACCAGCTGGA CACGAATGAG GTGATCCGCA TGCACACAGC CCCTGAATAC ACTGTGCTAT TTCTTGGTTT CCAGCCGGGA TTTCCCTACT TAGATGGCCT TAACAATCAC TTATTCACCC CAAGACTTAA CACACCAAGA TTATCCATAC CGGCAGGCTC TGTAGGTATT GGTGGCGAGC AAACGGGTAT TTACCCCCAA GAGGCACCGG GTGGCTGGCA GCTCATCGGC CGCACCAACC TTCCCCTGTT CACACCTGAC ACCCCAAAGA ATCCAACCCT TCTTGCTCCC GGATACAGGG TACGGTTTAC ACAAGTCAGC AGTTTAGAGT TTACCCAATG A
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Protein sequence | MSNTSPKVYR LGERAIVLDC SELFPALSKL TIQSRIWELA QKCREDNTFT DLVPGMNNLT LFIKDANQLT DWIARLPELW RDTTGIELDN PSIEIPVVYG GKYGPDLDEV ARVHQLDTNE VIRMHTAPEY TVLFLGFQPG FPYLDGLNNH LFTPRLNTPR LSIPAGSVGI GGEQTGIYPQ EAPGGWQLIG RTNLPLFTPD TPKNPTLLAP GYRVRFTQVS SLEFTQ
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