| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0009 |
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| Symbol | |
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| ID | 6114226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 12710 |
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| End bp | 13651 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631484 |
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| Product | urea amidolyase related protein |
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| Protein accession | YP_001758405 |
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| Protein GI | 170724379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000132728 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAACA AACTCCAGAA AGAGGTGTCG CTCTCAAGTG AGGATATTGA AGTACTCACC
CCAGGGCTAT TTAGCACAGT CCAAGGCATA GGTATAACAG GATATCGGCA TCTAGGGATC
CCCATTGGCG GTGCGCTGGA TAGTCACGCA CTGCTCCTAG GAAACCGACT ATTAGGCAAT
CCAGATGATA CTCAAGGAGT TGAACTGACC AGCGGAAAAG TGGAGCTTAA GTTTAACCGT
GACAGCTGGT TTGTCGTCAC CGGCGCTCAA TATCAAATAT TTATAGGTGA ACGAAATATC
TGGAATGGTT GGCGTAATAG AATCAAAGCT GGCGAAACCT TAACTCTCAA AGGTCCAAGT
TCCAAAATGC GCGCTTACTT GACGATAGAT GGCGGAATTA TTCAGCACTC ACCTCTTAAC
AAGCAAGGCT CTACCTCCCA AATGCTTGTG CGAGGAGACA GACTACAGCT CGGTAAGCCT
CTTCCTATCG CCAAGCCTAT CGGTGCAGTG CAAAGAGGTT ACAGTGATGA GATCCGCGCT
TTACCTGGGC CAGAGATGTC ACTTTTTACA GCCGCATCCC GCAAAGCCTT CTGGCACAAC
AGATGGCAAC TAACGAATGC CAGCAACCGC ATGGGAGCTC GGCTTAATGG CGAAGCGCTA
TCTCTAAGTA CAGCCAATGA GCTTAACTCT CATGCGGTGA TGCCAGGCGT AGTTCAAGTA
CCGCCATCGG GTCAGCCCAT CATTCTGCTT GCCGATGCAC AAACTACAGG TGGATACCCT
AAAATTGCTA CTGTGATAGA GGCTGACTTA TGGAAGCTGG CTCAAACTCG ACCTGGACAA
ACCATTCGAT TCGTTCATGT CAGCCCAAGC CAAGCCGATG ATGCAAACTA CGAGTGGCAG
CAATACTTTT ATCGCCTCCA AAGAGCCATC GATGGCTCGT AG
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| Protein sequence | MINKLQKEVS LSSEDIEVLT PGLFSTVQGI GITGYRHLGI PIGGALDSHA LLLGNRLLGN
PDDTQGVELT SGKVELKFNR DSWFVVTGAQ YQIFIGERNI WNGWRNRIKA GETLTLKGPS
SKMRAYLTID GGIIQHSPLN KQGSTSQMLV RGDRLQLGKP LPIAKPIGAV QRGYSDEIRA
LPGPEMSLFT AASRKAFWHN RWQLTNASNR MGARLNGEAL SLSTANELNS HAVMPGVVQV
PPSGQPIILL ADAQTTGGYP KIATVIEADL WKLAQTRPGQ TIRFVHVSPS QADDANYEWQ
QYFYRLQRAI DGS
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