| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0008 |
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| Symbol | |
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| ID | 6114225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 11944 |
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| End bp | 12684 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641631483 |
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| Product | LamB/YcsF family protein |
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| Protein accession | YP_001758404 |
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| Protein GI | 170724378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000119793 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTGAGAG TAAACGTGAA GAGCTACCCT ATCGACCTCA ACGCCGATCT GGGTGAAGGA
GGTCTCCATG ATGAAGCCCT ACTCCAAATA GTCACTTCCG CCAATATCGC TTGTGGTGGT
CACACTGGCG ATCAGCAAAC CATGACTGTT GCCGTTAAAG CTGCAGTCGA AAATAACGTC
AAGATTGGCG CCCACCCCAG TTATCCGGAT CCCATTAATT TCGGACGCGC TCCCATGGAT
ATCTCAAATC AGGCATTGCG TGAGTCTATA TCAGAGCAGA TCAGGGCATT AAAGAGTGTC
TGTGAGCGAC TGAACGCCGA AATGTTCCAC GTGAAACCTC ATGGTGCCTT TTACAATAAA
GTCGCTAAGG ATGAGGCTAT GGGGCTTATT TTAATAGAGG TGATTAAACA GGTAGATCCT
AGCCTTAAGT TGATGATCTT GGCGGGAAGT CCTTTAGTCA AGCAAGCTGA ACTTGCAGGA
CTCACTGTGA TTCAGGAGGC ATTTGCCGAT CGCGCCTATC TAAATGATGG CTCACTAGCC
CCCCGTGACC GGGAAGGGGC TGTCATACAC GATAGGCAGA CCGCATTAAC CCAAGTGAAA
CAGTTTATCG CTCAGCAACC AATCACCAGC TTAGATGGTC AACCTTTGAC AGTTAAAGCC
GATACCCTCT GTCTCCACGG TGATAATGAA CACGCGCTAG AGTTTGCCAG ATCCATTTAC
CAGATCATTC AAACCCAATA A
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| Protein sequence | MVRVNVKSYP IDLNADLGEG GLHDEALLQI VTSANIACGG HTGDQQTMTV AVKAAVENNV
KIGAHPSYPD PINFGRAPMD ISNQALRESI SEQIRALKSV CERLNAEMFH VKPHGAFYNK
VAKDEAMGLI LIEVIKQVDP SLKLMILAGS PLVKQAELAG LTVIQEAFAD RAYLNDGSLA
PRDREGAVIH DRQTALTQVK QFIAQQPITS LDGQPLTVKA DTLCLHGDNE HALEFARSIY
QIIQTQ
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