| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0003 |
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| Symbol | recF |
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| ID | 6114220 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 3127 |
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| End bp | 4224 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631478 |
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| Product | recombination protein F |
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| Protein accession | YP_001758399 |
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| Protein GI | 170724373 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
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| TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00186248 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000180359 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCCTGA CACGTCTTCA TATCGAAACC TTTCGAAATA TTAGTTCTGC TCAACTGCAT
CCCAGTGACG GTTTAAATCT GATTTATGGG CAAAATGGCA GTGGTAAAAC GAGTGTGCTT
GAGGCGATCT ACTTTCTGGG AATGGGGCGC TCCTTTCGGA GTCATCTATC TCAAAGGGTC
ATCCAGCACC AAGATGACAA ATTAACCCTG TTTGCCAATC TGAGTTTGGG TGAGCAGGAG
AGTAAAATCG GTTTGCGCCG TTTTAGAAGT GGCGAAACCG AGGTTAAGAT CAATGGCGAT
AAGATAAAGC GTTTATCGAC CTTAGCCGAG ACTTTACCCA TTCAGGTGAT CACGCCAGAG
AGTTTTTCTT TGCTGTTTGA GGGGCCGAAA TCGAGACGTC AGTTTATCGA TTGGGGAGCG
TTTCATAGTG ATAAAAGTTT TCACTCGGCA TGGGCCAATG TGAAGCGAAT TTTAAAGCAA
AGAAATCAGC TACTTAAAAA TCAAGTTTCC TATAGCCAGA TTCAATTTTG GGATAAGGAG
TTGGTGCGTT ATTCTGAGCT GGTAACCCTG ATACGAAAAG AATATGTAGA CTCGTTAAAT
GAACAACTTA AGGGTATAAT CGTAGAGTTT TTACCTCAGG TTGAAGTGAA AGTTTCATTT
ACACGTGGTT GGGACAGTAA AACGGATTTT GGACAACTGC TCGAGACGCA ATATCTGAGA
GATGTTGCGG CGGGAAATAC AGGTAGTGGT CCCCATAAAG CCGACTTACG ATTGCGTGTT
GGCACCTTGC CCGTACAAGA TGCCTTGTCT AGGGGTCAAT TGAAATTGTT AGTCTGTGCA
TTACGTATTG CACAGGGAAA GTTGCTAAAA CAACAAACAG ATAAAAATAG TATTTATCTG
GTGGATGATC TTCCATCGGA ATTGGATGCG AAGCACAGGC AACTATTGTT GCAGCAATTG
ATGGATACCG GCGCACAGAT TTTTGTCACC GCTATCGATC CTGCAGCGAT AGTCGATTCG
TTAACCACAC CACCAAGTAA GATGTTCCAT GTGGAACAGG GGTGTGTAAC GGTAATAGAT
AAACCGACGA GAGAATAA
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| Protein sequence | MSLTRLHIET FRNISSAQLH PSDGLNLIYG QNGSGKTSVL EAIYFLGMGR SFRSHLSQRV
IQHQDDKLTL FANLSLGEQE SKIGLRRFRS GETEVKINGD KIKRLSTLAE TLPIQVITPE
SFSLLFEGPK SRRQFIDWGA FHSDKSFHSA WANVKRILKQ RNQLLKNQVS YSQIQFWDKE
LVRYSELVTL IRKEYVDSLN EQLKGIIVEF LPQVEVKVSF TRGWDSKTDF GQLLETQYLR
DVAAGNTGSG PHKADLRLRV GTLPVQDALS RGQLKLLVCA LRIAQGKLLK QQTDKNSIYL
VDDLPSELDA KHRQLLLQQL MDTGAQIFVT AIDPAAIVDS LTTPPSKMFH VEQGCVTVID
KPTRE
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