Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5648 |
Symbol | |
ID | 6141726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 5979657 |
End bp | 5980331 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641631353 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001758276 |
Protein GI | 170752016 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0361542 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCCCG CTGACGAAGA GCGCGATCCG ACCGGCCGGT CCGATCCCGT CATCTCGCCT ATCCACGCGC AGCTGGCTGA ACGGCTGCGA CAACACTATT CAGAAGTTGC ACCGATCGAG ATCGGCCCAC GTCTCGCCGC CGTGCTGAAC CAGCTGTCCG CGGCGCTGGA TGCCGCCGAG GTCGGGCGGC AGGTGCCCCA TGCCTTCAAG GACGATCTGA TTGCCCTGGC GCCACGCCTG CGTCGCTACG CCCTGACGCT GACGTTCGAC GGCGTCGAGG CCGACGATCT CGTGCAGTTC ACGCTGCTCA AAGCCTGGGA GCATCGGCAG CGCTTCCAGC CCGGCACGAG CCTCGTGGCG TGGCTGTTCA CGATCCTGCG CAACGGCTTC ATCAACGGAC GGCGCAAGCG ACGCCTCGAG GTCCCGGATC CCGACGGCGT GCACGCCACG GCCCTCTCGG AACCGGCCGC CCAGGAACAC AGCATGGGCT TGTCGGAGGT CCGAGCCGCG ATCGACCGGC TCGAACCAGC CTATCGCGAG GCGCTGATCC TGGTCGCCGT CGACGGCCTT CCCTACGAGG CCGCCGCTTC CGTGATCGGG TGTCCCGCGG GCACCGTGAA GAGCCGCGTC AGCCGCGCCC GCGACCGGCT GCTTCAGGAG TTGGGCGAGC GCTGA
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Protein sequence | MKPADEERDP TGRSDPVISP IHAQLAERLR QHYSEVAPIE IGPRLAAVLN QLSAALDAAE VGRQVPHAFK DDLIALAPRL RRYALTLTFD GVEADDLVQF TLLKAWEHRQ RFQPGTSLVA WLFTILRNGF INGRRKRRLE VPDPDGVHAT ALSEPAAQEH SMGLSEVRAA IDRLEPAYRE ALILVAVDGL PYEAAASVIG CPAGTVKSRV SRARDRLLQE LGER
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