Gene Mrad2831_5648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5648 
Symbol 
ID6141726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5979657 
End bp5980331 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content69% 
IMG OID641631353 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001758276 
Protein GI170752016 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0361542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCCG CTGACGAAGA GCGCGATCCG ACCGGCCGGT CCGATCCCGT CATCTCGCCT 
ATCCACGCGC AGCTGGCTGA ACGGCTGCGA CAACACTATT CAGAAGTTGC ACCGATCGAG
ATCGGCCCAC GTCTCGCCGC CGTGCTGAAC CAGCTGTCCG CGGCGCTGGA TGCCGCCGAG
GTCGGGCGGC AGGTGCCCCA TGCCTTCAAG GACGATCTGA TTGCCCTGGC GCCACGCCTG
CGTCGCTACG CCCTGACGCT GACGTTCGAC GGCGTCGAGG CCGACGATCT CGTGCAGTTC
ACGCTGCTCA AAGCCTGGGA GCATCGGCAG CGCTTCCAGC CCGGCACGAG CCTCGTGGCG
TGGCTGTTCA CGATCCTGCG CAACGGCTTC ATCAACGGAC GGCGCAAGCG ACGCCTCGAG
GTCCCGGATC CCGACGGCGT GCACGCCACG GCCCTCTCGG AACCGGCCGC CCAGGAACAC
AGCATGGGCT TGTCGGAGGT CCGAGCCGCG ATCGACCGGC TCGAACCAGC CTATCGCGAG
GCGCTGATCC TGGTCGCCGT CGACGGCCTT CCCTACGAGG CCGCCGCTTC CGTGATCGGG
TGTCCCGCGG GCACCGTGAA GAGCCGCGTC AGCCGCGCCC GCGACCGGCT GCTTCAGGAG
TTGGGCGAGC GCTGA
 
Protein sequence
MKPADEERDP TGRSDPVISP IHAQLAERLR QHYSEVAPIE IGPRLAAVLN QLSAALDAAE 
VGRQVPHAFK DDLIALAPRL RRYALTLTFD GVEADDLVQF TLLKAWEHRQ RFQPGTSLVA
WLFTILRNGF INGRRKRRLE VPDPDGVHAT ALSEPAAQEH SMGLSEVRAA IDRLEPAYRE
ALILVAVDGL PYEAAASVIG CPAGTVKSRV SRARDRLLQE LGER