Gene Mrad2831_5588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5588 
Symbol 
ID6141662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5911656 
End bp5912744 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID641631289 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_001758216 
Protein GI170751956 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01123] branched-chain amino acid aminotransferase, group II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0289083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC TGACGTTCGA GATCCAAAGT CATCCCGCGC CGCGGACCGC CGAGGAGCGG 
GCCGCACTGA TGGCGAATCC AGGCTTCGGC AAGGTGTTCA CAGACCACAT GGTGGTGGCG
CGGTACACGG CCGGCCGCGG CTGGCACGAC GCGCGGATCC AGGCCCGCGA GGCCATCCCG
CTCGACCCCG CCGCCGCGGT GCTGCACTAC GCGCAGGAGA TCTTCGAAGG CCTCAAGGCC
TACCGCACCG CTGACGGCGG CGCGGCCCTG TTTCGACCCG AGGCGAACGC CCTGCGGTTC
CGCCGCTCGG CCGAGCGCAT GGCGATGGCG CCGTTCCCCG AGGACGCCTT CGTGGAGGCG
ATGCGCAAGC TCGTCGAGAT CGACCGCGCC TGGATCCCCG ACACGCCGGA CGGCAGCCTC
TACCTGCGCC CGTTCATGAT CGCCAGCGAG GCTTTTCTCG GGGTCAAGCC GGCCTCGGAA
TACCTGTTCG TGACGATCGC CTCGGCGGTG GGCTCCTACT TCAAGGATCC GACCGGGACG
GTCACGGTGT GGATCTCGGA GCACTTCACC CGCGCGGCCC CGGGGGGAAC GGGCGCGGCC
AAGTGCGGCG GCAACTACGC CGCGAGCCTC GCGGCGCAGT CGGAAGCGGC GTCCCAGGGC
TGCGAGCAGG TGGTGTTCCT AGACGCGGCC GAGCGCCGGT TCGTCGAGGA ACTCGGCGGC
ATGAACGTGT TCTTCGTCTT CGAGGACGGC ACGCTGGTGA CGCCGCCGCT CTCGGACAGC
ATCCTGCCTG GCATCACCCG CGACTCGGTG ATCACCCTGG CCCGGGAGGC CGGCCTGACG
GTCAAGGAGG AGCCCTACAC GATCGACGCG TGGCGCGCCG ACGTGCGGGA GGGACGCCTC
ACCGAGGCCT TCGCCTGCGG CACCGCCGCG GTGATCACGC CGATCGGCAC CGTGAAGGGC
CGGGAGGAGA GCTTCACGAT CGGGAACGGC AAGGCCGGCC CGGTGGCCCA GCGGCTGCGG
AGCCTGCTGG TGGACATCCA GCGGGGCAAT TCCAATGACG CCCATGGCTG GTTCCAGAAG
ATCTTCTAG
 
Protein sequence
MSDLTFEIQS HPAPRTAEER AALMANPGFG KVFTDHMVVA RYTAGRGWHD ARIQAREAIP 
LDPAAAVLHY AQEIFEGLKA YRTADGGAAL FRPEANALRF RRSAERMAMA PFPEDAFVEA
MRKLVEIDRA WIPDTPDGSL YLRPFMIASE AFLGVKPASE YLFVTIASAV GSYFKDPTGT
VTVWISEHFT RAAPGGTGAA KCGGNYAASL AAQSEAASQG CEQVVFLDAA ERRFVEELGG
MNVFFVFEDG TLVTPPLSDS ILPGITRDSV ITLAREAGLT VKEEPYTIDA WRADVREGRL
TEAFACGTAA VITPIGTVKG REESFTIGNG KAGPVAQRLR SLLVDIQRGN SNDAHGWFQK
IF