| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5432 |
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| Symbol | |
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| ID | 6141505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 5738757 |
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| End bp | 5740418 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641631134 |
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| Product | TolC family type I secretion outer membrane protein |
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| Protein accession | YP_001758062 |
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| Protein GI | 170751802 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.199925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACGAC GTCCACCAGC GAGTTGCCCG ACGTTCCGCC TGGCCGGGAT GGTGTCCGGA
CTCGCGATGC TGGCTGCGAT GCCGGCATCC GCCGAGACTC TGGAGAGCGC TCTCGCGAAG
GCTTATCAGG GCAATCCGAG CCTGAACGCC AGCCGCGCGG GCGTGCGCGC CATCGACGAG
AACGTGGCGA TCGCGCAGTC GGGCTACCGG CCGACTGTCA ACGTCAACGC CGCGATCGGC
GTCCAGTACC TTCAGACGCG CTCGTCCAGC TCCGTCGCGT CGGCGGGCAC CGCCGGCACG
ACCGCGACCA CCGCCGGAGC GGGCCTCGGA ACGACAGGCG GAGGCCTGGG CGGGACGGCC
GGCGCCGGGA CGACCGGTAC CGGGACCACC ACGGGGATCG GGACGACGGG GATCGGGACG
GCGGGCGGAA CCACGGGCAT CGGGACCTCA GGAGCCGGGG CGGCAGGATC CGCGACCGGC
GGCGAGGGCT TGGCCGGCGG CGCGACGTCC GACATCGCGA GCCAGGTCAT CACCTCCCGG
CGGACGACGC GCACCACGTA CCTTCCGAGT TCCGCCAGCC TGAACGTCAC GCAGACGCTC
TTCAACGGCT TCCAGACCGA CAACACCGTC CGACGCGCCG AGTCGCAGGT CTACAGCCAG
CGCGAGAGCC TGCGCTTCAC CGAATTGACC GTCCTGTACA ACGCCGTCCA GGCGTACATG
AACGTGCTCA GCAACACGGC GACGCTGGAG CTGAACCGGA ACAACGTCGA AGTTCTGGAA
GAGCAGCTCC GCCAGACCCG GGACCGCTTC AACGTCGGCG AGGTGACCCG GACCGACGTC
GCGCAGGCCG AGGCCCGACT GGCCGGCGCG CGGTCGCAGG TCGCCCAAGC CGAATCGACC
CTCCGCACGA GCATCGGCGT CTACCGGCAG AACATCGGCG TCGAGCCGCG CCAGCTCGCG
CCGGGCCGCC CGCTGGACCG GTTCGTGCCG CGCAGTCTCG ATCAGGCGAT CGCCGTCGGC
CTGCGCGAGC ACCCGCAGGT CGTCTCGGCC ATCCACAACG TCGACGCGAG CGAGGCCCAG
GTGAAGGTCC TGGAAGGCCA GCTCGCCCCG CAGCTCAGCC TGCAGGGCTC GCTCAGCCAG
CTCTACGATC AGAACGGGCC GAACCAGAGC TTCTTCGTCG GCTTCGTCGG CGGCCGGCTC
TCGATCCCGA TCTACGAGGG CGGCCAGACC TACGCGCAGA TCCGGCAGGC CAAGGAATCG
GTCGGCCAGG CCCGCATCCA GGTCGATCAG ATCCGCGATC AGGTCCGCGC CCAGATCGTC
GACTTCTGGG GCCGGCTCGA AGCCGCCAAG GCGCAGGTGA TCGCCGCCCA GGCCCAGGTC
CAGGCCAACG AGGTGGCGCT GAACGGCGTG CGCGAGGAAG CGCGCGTCGG CCAGCGCACG
ACCCTCGACG TCCTCAACGC GCAGCAGGAA CTGCTGAACT CCCGCGTGAA CCTCATCGTC
GCCCAGCGCG ACCGGGTGAT CTTCTCCTAC GGGGTGGTCC AGGCGATCGG ACAGTTGACC
GCGCGCTTCA CGGCGCTCCC GGTCGAATAC TACAGCGCCA AGGTCCACTA CGATCAGGTC
AAGGATCTGT GGTTCGGCCT GCGCACGCCG GACGGCCGCT GA
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| Protein sequence | MTRRPPASCP TFRLAGMVSG LAMLAAMPAS AETLESALAK AYQGNPSLNA SRAGVRAIDE
NVAIAQSGYR PTVNVNAAIG VQYLQTRSSS SVASAGTAGT TATTAGAGLG TTGGGLGGTA
GAGTTGTGTT TGIGTTGIGT AGGTTGIGTS GAGAAGSATG GEGLAGGATS DIASQVITSR
RTTRTTYLPS SASLNVTQTL FNGFQTDNTV RRAESQVYSQ RESLRFTELT VLYNAVQAYM
NVLSNTATLE LNRNNVEVLE EQLRQTRDRF NVGEVTRTDV AQAEARLAGA RSQVAQAEST
LRTSIGVYRQ NIGVEPRQLA PGRPLDRFVP RSLDQAIAVG LREHPQVVSA IHNVDASEAQ
VKVLEGQLAP QLSLQGSLSQ LYDQNGPNQS FFVGFVGGRL SIPIYEGGQT YAQIRQAKES
VGQARIQVDQ IRDQVRAQIV DFWGRLEAAK AQVIAAQAQV QANEVALNGV REEARVGQRT
TLDVLNAQQE LLNSRVNLIV AQRDRVIFSY GVVQAIGQLT ARFTALPVEY YSAKVHYDQV
KDLWFGLRTP DGR
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