Gene Mrad2831_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5243 
Symbol 
ID6141314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5564406 
End bp5566019 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content69% 
IMG OID641630949 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001757879 
Protein GI170751619 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.727139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTCT CCCGATACCT CGGCCGACGC GGCCGAGCGA TGATCACGGC CGGCCTGCTC 
GGCCTTGCCG GATGCACGGT CGGGCCCGAC TTCGCCCCGC TTGCGACGCC GCTCGCAGAC
GCGGGCGACT ATCTCGACAC CGGCCTCGTC GCGCCGACGC CACGGCGACT CCTGGCACGC
ACCATCGACG CCGAACCGGA CGTTGCGTGG TGGCTCGCCT TCCGCGATCC CGTGCTGGCG
CAACTTGAGG ACCGTCTGGC GGCCCAGAAC CTCGACGTTC AGACCACCAC CGCGCGGCTG
TTCCAGAGCC GGTCCCAGAT CAATACCGCC GCTGCCGCGG GCCTGCCGAC CCTCAACGGG
CAAGGCAGCG CCTACCGGCA GCAGTTCAGC AAGAACGGCA CCATCGGCCT CCTCTCCAAC
TCGCTCGGCA GCCTGACGGG CGGAAGCAGC GGCGCTTCCA GCGGCAACCT GACGGCGCCG
CTGACCAACG GCTTCGAGAG CTACACGCTG GGCTTCGACG CCTCCTGGGA ACTCGACCTC
TGGGGCAAGG TCCGGCGCTC GGTCGAGTCC GCAGAGGCCC AGGCGGACGC CTCCGCGGAA
GCGAGGCGCG ACGCGCTGAT CTCCGGCCAG GCCGAACTCG CGCGAGCCTA CGTGCAGTTG
CGGGGCACCC AGGAGCTCAT CCGGATCGAC CTCGCCAACA TCCGGGTCAA CGAGCAGATC
CTCGACGTCG TCCGGGTGCG TCAGCAGAAG GGATTGGTCA CCGGACTCGA TACGTCCAGT
GCGGCACAGC AGGTCGAGGC GATCAAAGCG CAGCTGCCGC AGCTCCAGCA GCAGGAGATC
CAGCAAATCA ACGCGATCTC TCTGCTGCTC GGCGAACCGC CGCTGGCGCT CTCGCAGGAA
CTCGTCGCCG GCCCCTCGAT CCCGCCCGTG CCCCCGCGCA TACCCATCGG TGTGCCGTCG
AGCCTGGTCA TGCGCCGGCC CGACATCCGC AGGGCCGAGG CCAACCTGCA TTCGGCCGTG
GCCGAGATCG GTGTCGCGGA AGCGCAGTTC TTCCCAAGCG TTACGCTGAC CGGAAGCCCG
ACCGTGAATT CGGTCGACCC GGGCAAGCTC TTCCGGGGCT CGTCGCTCCA GTACATGAAC
ATCGGCCCTT CGATCTCCAT CCCGCTGTTC GAGGGCGGGC GGCTCAAGTC GAACCTAGTG
CTCCAGCGCG CCCGGCAACA GGAGGCGGCC ATTGCCTACC AGAAGGCGGT GCTCCAGGGC
TGGCACGACG TCGTCAACGC CCTCGCCGCT CTACGCGGTG ACGAGGCCCG CCGAGCGCGT
CTGGCCAGGC AGGTGGCCGA TGCGCGCCAA GCCCTCGCCC TGTCGCGGGC GCGATACGTC
CAGGGCGTCG AAATCTTCAC GACCGTCCTC CAGGCTTCAC AGACGGTGCT CCAAGCCGAG
ACCAGCCTGT CCCAGGCGAC GGCCGCTATC TCGACCGACT TCGTCGCGCT GTCGAAGGCG
CTCGGCGGCG GCTGGGAGAC GACCTTCCCG GTCGGACGGA CGCCGCCCCT GTCCCTGGCC
AAGGTGGGCA TCCCGCTCAC GGACGTCGTG CACGACGGGG CCCTCGGCCG ATGA
 
Protein sequence
MTLSRYLGRR GRAMITAGLL GLAGCTVGPD FAPLATPLAD AGDYLDTGLV APTPRRLLAR 
TIDAEPDVAW WLAFRDPVLA QLEDRLAAQN LDVQTTTARL FQSRSQINTA AAAGLPTLNG
QGSAYRQQFS KNGTIGLLSN SLGSLTGGSS GASSGNLTAP LTNGFESYTL GFDASWELDL
WGKVRRSVES AEAQADASAE ARRDALISGQ AELARAYVQL RGTQELIRID LANIRVNEQI
LDVVRVRQQK GLVTGLDTSS AAQQVEAIKA QLPQLQQQEI QQINAISLLL GEPPLALSQE
LVAGPSIPPV PPRIPIGVPS SLVMRRPDIR RAEANLHSAV AEIGVAEAQF FPSVTLTGSP
TVNSVDPGKL FRGSSLQYMN IGPSISIPLF EGGRLKSNLV LQRARQQEAA IAYQKAVLQG
WHDVVNALAA LRGDEARRAR LARQVADARQ ALALSRARYV QGVEIFTTVL QASQTVLQAE
TSLSQATAAI STDFVALSKA LGGGWETTFP VGRTPPLSLA KVGIPLTDVV HDGALGR