Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_5243 |
Symbol | |
ID | 6141314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 5564406 |
End bp | 5566019 |
Gene Length | 1614 bp |
Protein Length | 537 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641630949 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001757879 |
Protein GI | 170751619 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.727139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCTCT CCCGATACCT CGGCCGACGC GGCCGAGCGA TGATCACGGC CGGCCTGCTC GGCCTTGCCG GATGCACGGT CGGGCCCGAC TTCGCCCCGC TTGCGACGCC GCTCGCAGAC GCGGGCGACT ATCTCGACAC CGGCCTCGTC GCGCCGACGC CACGGCGACT CCTGGCACGC ACCATCGACG CCGAACCGGA CGTTGCGTGG TGGCTCGCCT TCCGCGATCC CGTGCTGGCG CAACTTGAGG ACCGTCTGGC GGCCCAGAAC CTCGACGTTC AGACCACCAC CGCGCGGCTG TTCCAGAGCC GGTCCCAGAT CAATACCGCC GCTGCCGCGG GCCTGCCGAC CCTCAACGGG CAAGGCAGCG CCTACCGGCA GCAGTTCAGC AAGAACGGCA CCATCGGCCT CCTCTCCAAC TCGCTCGGCA GCCTGACGGG CGGAAGCAGC GGCGCTTCCA GCGGCAACCT GACGGCGCCG CTGACCAACG GCTTCGAGAG CTACACGCTG GGCTTCGACG CCTCCTGGGA ACTCGACCTC TGGGGCAAGG TCCGGCGCTC GGTCGAGTCC GCAGAGGCCC AGGCGGACGC CTCCGCGGAA GCGAGGCGCG ACGCGCTGAT CTCCGGCCAG GCCGAACTCG CGCGAGCCTA CGTGCAGTTG CGGGGCACCC AGGAGCTCAT CCGGATCGAC CTCGCCAACA TCCGGGTCAA CGAGCAGATC CTCGACGTCG TCCGGGTGCG TCAGCAGAAG GGATTGGTCA CCGGACTCGA TACGTCCAGT GCGGCACAGC AGGTCGAGGC GATCAAAGCG CAGCTGCCGC AGCTCCAGCA GCAGGAGATC CAGCAAATCA ACGCGATCTC TCTGCTGCTC GGCGAACCGC CGCTGGCGCT CTCGCAGGAA CTCGTCGCCG GCCCCTCGAT CCCGCCCGTG CCCCCGCGCA TACCCATCGG TGTGCCGTCG AGCCTGGTCA TGCGCCGGCC CGACATCCGC AGGGCCGAGG CCAACCTGCA TTCGGCCGTG GCCGAGATCG GTGTCGCGGA AGCGCAGTTC TTCCCAAGCG TTACGCTGAC CGGAAGCCCG ACCGTGAATT CGGTCGACCC GGGCAAGCTC TTCCGGGGCT CGTCGCTCCA GTACATGAAC ATCGGCCCTT CGATCTCCAT CCCGCTGTTC GAGGGCGGGC GGCTCAAGTC GAACCTAGTG CTCCAGCGCG CCCGGCAACA GGAGGCGGCC ATTGCCTACC AGAAGGCGGT GCTCCAGGGC TGGCACGACG TCGTCAACGC CCTCGCCGCT CTACGCGGTG ACGAGGCCCG CCGAGCGCGT CTGGCCAGGC AGGTGGCCGA TGCGCGCCAA GCCCTCGCCC TGTCGCGGGC GCGATACGTC CAGGGCGTCG AAATCTTCAC GACCGTCCTC CAGGCTTCAC AGACGGTGCT CCAAGCCGAG ACCAGCCTGT CCCAGGCGAC GGCCGCTATC TCGACCGACT TCGTCGCGCT GTCGAAGGCG CTCGGCGGCG GCTGGGAGAC GACCTTCCCG GTCGGACGGA CGCCGCCCCT GTCCCTGGCC AAGGTGGGCA TCCCGCTCAC GGACGTCGTG CACGACGGGG CCCTCGGCCG ATGA
|
Protein sequence | MTLSRYLGRR GRAMITAGLL GLAGCTVGPD FAPLATPLAD AGDYLDTGLV APTPRRLLAR TIDAEPDVAW WLAFRDPVLA QLEDRLAAQN LDVQTTTARL FQSRSQINTA AAAGLPTLNG QGSAYRQQFS KNGTIGLLSN SLGSLTGGSS GASSGNLTAP LTNGFESYTL GFDASWELDL WGKVRRSVES AEAQADASAE ARRDALISGQ AELARAYVQL RGTQELIRID LANIRVNEQI LDVVRVRQQK GLVTGLDTSS AAQQVEAIKA QLPQLQQQEI QQINAISLLL GEPPLALSQE LVAGPSIPPV PPRIPIGVPS SLVMRRPDIR RAEANLHSAV AEIGVAEAQF FPSVTLTGSP TVNSVDPGKL FRGSSLQYMN IGPSISIPLF EGGRLKSNLV LQRARQQEAA IAYQKAVLQG WHDVVNALAA LRGDEARRAR LARQVADARQ ALALSRARYV QGVEIFTTVL QASQTVLQAE TSLSQATAAI STDFVALSKA LGGGWETTFP VGRTPPLSLA KVGIPLTDVV HDGALGR
|
| |