| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5228 |
|---|
| Symbol | |
|---|
| ID | 6141299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5546057 |
|---|
| End bp | 5549731 |
|---|
| Gene Length | 3675 bp |
|---|
| Protein Length | 1224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641630937 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001757867 |
|---|
| Protein GI | 170751607 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCGC CTGAGCAGGC CGCCCGCGAT CCGGCCCGGC TTGCCGCCCT CGACGGATAC
GGCATCCTCG ACACGCCGGC CGAGCAGGGT TTCGACGACA TCGTGCTACT TGCGTCCCGC
ATCTGCGGCA CGCCGGTCGC CCTGGTCAGC CTCGTCGCCG GCGACCGGCA GTGGTTCAAG
GCCCGCGTCG GCTTCGACCC GTGCGAGACC CCGCTGTCGC AATCGGTCTG CGCGCATGCC
CTCCGGCAGC CGGGCCTGCT GGTCATCCCC GACCTGACCG AGGACCCGCG CACCCGGGAT
AACCCGCTGG TCACCGACGA GCCCCGGCTC AGGTTCTACG CTGGTGCCCG GTTGGAAACC
CCCGACGGCA TGCCGCTCGG CACCCTGTGC GTGATCGACG GGACGCCCCG GCCCGAGGGA
CTGACGCTAG AGCAAGCCGA GTCCCTCCAG GCGCTCGCGC GGCAGGTCAT GGCGCAGATG
GACCTGCACC GATCGATGGC CGAACGCGAC GACGCCCTGC GTCAGGTCCG GGAGGCCGCC
ACCCGACACC GCCAGATCCT CGACAGCGCC ATCGATTACG CGATGGTGAC GTTGGACCTG
GACGCCCGCG TGACCGGCTG GAGCGCCGGC GCCGAGGTCA TCCTCGGCTG GTCGGAGGCG
GAGATGCGCG GCCGGCCGGC CCACGTCTTC TTCACCGAGG AGGACGTCGC CGCGGGCATC
CCCGAGGACG AGATGCGGGG CGCCAGGGAG AAGGGTCGCG GGAACGACGA ACGCTGGCAC
CTGCGCAAGG ACGGCTCTCG GTTCTTCGCC GCGGGCGAGA TGATGCCGCT GCACGACGAG
GACGGCGGGC TCGTCGGTTA CCTGAAGATC CTGCGCGACC GCACGGGCCA GCACCTGGCG
GGGAAGGCAC TCGCGGAAGC CGAGATGCGT CTGCGTAAGG CGCAGGCGGC CGGCGGCGTT
GGCCTGTTCA CCGTCGACAT GGCCGACAAC GTCCTCACGC CGACCCCGGA ATTCTGCCGC
CTCTACGGGC TGCCCGAGCA GGCGAGCTAC CCTGCGACGG CGTTCGAGGG ACTGGTGATC
CCCGAGGACG CACACCTCGT CTCGACGGCG GAGAGCCGTC GGGAGGGCGG TCCGCCCCGG
GACGTCGAAT ACCGCATCCG TCGTCCCGAC ACCGGCGAGC TGCGGTGGAT CGCCCGCAAG
GGCGAGATCG ACCACGACCC ATCCGGCCGA CCGGTCCGGT TCTCCGGAGT GGCACGCGAC
GTCACCGAGC AGCGCAAGGC CCGCGACGCG CTCGCGGTCA GCGAGGAACG CTACCGGACC
CTGTTCGACA GCATCGACGA GGGCTTCTGC GTCATCCGAT TCCTGGACGG GCCTCGCGGA
CCCCTCAGCG ACTACGTGCA TGTCGAGGCC AATCGCGCCT TCGCGCACCA TCTCGGAATC
GACGACGCGG TAGGGCGGAC GTTGCGCGAC ATTATCCCCG ACGAGGGAGC CGAGGGCTGG
CTCGGGATCT ACGGCGACGT GCTGCGCACC GGTGAGCCCG TCCGGTTCCA GCGCCAGTTC
GCGCCGAACG GCCGTCACCT GGAGGTCGCC GCGCATCGCG TCGAGCCGGC CAGCCGCCGG
GAGGTCGCGG TGCTGTTCAC CGACGTCACC GCCCGCAAGG AGGCGGAGGC GGCCCTGCGC
GCGAGCGAGG CGCTGGCGCG TGAGAACGTG CAGCGCGTCC AGTTGGCCCT CGCGGCCGGC
GCGATCATCG GCACCTGGCT CTGGGACCTT CCCAACGACC GTTTCACGGT CGATGCGGCG
TTCGCCTGCG CCTTCGGCCT CGACCCCGCG CTCGGCAGGG AAGGCATCCC GCTCGCCCGG
ATCGTCGAGA CCGTCCATCC CGACGATCAG GCCGGATTGG CCGAAGCCAT AAACGTCGCC
ATCGCGCGCG GGGGGCCCTA CGCCCACCAG TATCGCGTGC GCCGCGCCGA TGGACGCTAC
TACTGGATCG AGGCGAACGG CCGGGTCGAG CATGCCGCCG ACGGAACGCC GATGAGCTTC
CCAGGGGTTC TCCTCGACGT GGAGGACCGG CGTGCGGTGG AGGCCGAGCG CGACCGCGTC
GCCGCGGACC TGCGCGCCCT CAACGAGACG CTGGCGGCCC AGGTCGCCGA GCGCACCCAT
GAGCGCGACC GAATCTGGCA CGTGAGCCGC GACATGCTCG GGGTCGCCGA CGCGAACGGT
GTCTGGGTGA GCATCAACCC GGCTTGGCAC CGCATCCTGG GATGGGACTA CCACGACATC
GTCGGCAAGA CCTCGGAGTG GCTTGAACAC CCGGACGACC GCGAGAGGAC CCGGGCCGAG
GTCGCGCACC TCGCCGCCGG CGGCCTGACG CTCGCGTTCG AGAACCGCTT TCGCGCCCGT
GACGGCAGCT ACCGTACGCT GTCCTGGACC GCCGTGCCGG TCGAGGGCCT GCTCTACTGT
GTCTCCCGCG ACGTGACGCT GGAGAAGGAG CGCGCCGAGA CCCTGCTTCA GGCCGAGGAG
GCGTTGCGGC AATCGCAAAA GCTGGAGGCG GTCGGACAGT TGACCGGGGG CGTCGCGCAC
GATTTCAACA ACCTGCTCAC CGTCATCAAG TCGTCGACCG ACCTGCTCAA GCGGCCGGAC
CTGACGGAGG ACCGGCGGGT CCGCTACATC GCCGCGATCT CCGATACCGT CGACCGGGCA
GCCAAGCTCA CCGGGCAACT CCTCGCCTTC GCCCGGCGCC AGGCTCTGCG GCCGGAGGTA
TTCGACGCCG GCCGGAGCGT GAAGTCCATC GGCGAGATGG TCGAGACCCT GACCGGGGCT
CGTATCGCCG TCTCGATCCG GGTCGGCGAC GAGCCTTGCC ACATCCATGC GGACCCGAGC
CAGTTCGACA CGGCGCTGGT CAACATGGCG GTCAACGCCC GCGACGCGAT GGACGGCGAG
GGTCGGCTCG ACATCTCGGT GGAGGCGGTG GGCATCGTGC CGGCGATGCG GTCGCATCCC
GCGATGGTCG GCGATTACGT CCGGATCGCG CTGTCCGACA CCGGCTCCGG CATCCCGGCC
GAGCAGATCG ACCGGATCTT CGAGCCGTTC TTCACGACGA AGGGCGTCGG CCAGGGCACC
GGGCTCGGGC TGTCCCAGGT GTTCGGGTTC GCCAAGCAGT CGGGCGGCGA GGTGAAGGTC
GAGAGCGAGG TCGGTCGCGG CACCACGTTC GCCCTTTACC TTCCGCGGGC GGAAAAGGGT
GAAGGTGGTG TCGAGGATGC GGTGCCGCCG GATGCGGTCG TCGACGGGCG TGGGACCTGC
GTGCTGGTGG TAGAGGACAA CCGGGACGTC GGAACCTTCT CGACCCAGAC CCTGCAGGAA
CTCGGCTACG GAACCCATTG GGTCGCTAAC GCCGACGAGG CCCTCGCGGC CCTAGCGGAG
AAGCCGGACA CCTACGACGT GGTGTTCTCG GACGTGGTCA TGCCGGGCAT GAACGGTGTC
GAGTTCGGGC GGGAGGTCCG GCGGCTGTAT CCCGGCCTGC CGGTGGTGCT GACCAGCGGC
TACAGCCACG TGCTCGCGCA GGAGAGCGAC CACGGCTTCG AGCTCCTGCA GAAGCCGTAC
TCGGTCGAGG CGCTGTCGCG CATCCTCCGC CGCGCCGCCT CGAAGCCCCG GCGACGCAGG
AAGGCGGCGG GATAG
|
|---|
| Protein sequence | MTAPEQAARD PARLAALDGY GILDTPAEQG FDDIVLLASR ICGTPVALVS LVAGDRQWFK
ARVGFDPCET PLSQSVCAHA LRQPGLLVIP DLTEDPRTRD NPLVTDEPRL RFYAGARLET
PDGMPLGTLC VIDGTPRPEG LTLEQAESLQ ALARQVMAQM DLHRSMAERD DALRQVREAA
TRHRQILDSA IDYAMVTLDL DARVTGWSAG AEVILGWSEA EMRGRPAHVF FTEEDVAAGI
PEDEMRGARE KGRGNDERWH LRKDGSRFFA AGEMMPLHDE DGGLVGYLKI LRDRTGQHLA
GKALAEAEMR LRKAQAAGGV GLFTVDMADN VLTPTPEFCR LYGLPEQASY PATAFEGLVI
PEDAHLVSTA ESRREGGPPR DVEYRIRRPD TGELRWIARK GEIDHDPSGR PVRFSGVARD
VTEQRKARDA LAVSEERYRT LFDSIDEGFC VIRFLDGPRG PLSDYVHVEA NRAFAHHLGI
DDAVGRTLRD IIPDEGAEGW LGIYGDVLRT GEPVRFQRQF APNGRHLEVA AHRVEPASRR
EVAVLFTDVT ARKEAEAALR ASEALARENV QRVQLALAAG AIIGTWLWDL PNDRFTVDAA
FACAFGLDPA LGREGIPLAR IVETVHPDDQ AGLAEAINVA IARGGPYAHQ YRVRRADGRY
YWIEANGRVE HAADGTPMSF PGVLLDVEDR RAVEAERDRV AADLRALNET LAAQVAERTH
ERDRIWHVSR DMLGVADANG VWVSINPAWH RILGWDYHDI VGKTSEWLEH PDDRERTRAE
VAHLAAGGLT LAFENRFRAR DGSYRTLSWT AVPVEGLLYC VSRDVTLEKE RAETLLQAEE
ALRQSQKLEA VGQLTGGVAH DFNNLLTVIK SSTDLLKRPD LTEDRRVRYI AAISDTVDRA
AKLTGQLLAF ARRQALRPEV FDAGRSVKSI GEMVETLTGA RIAVSIRVGD EPCHIHADPS
QFDTALVNMA VNARDAMDGE GRLDISVEAV GIVPAMRSHP AMVGDYVRIA LSDTGSGIPA
EQIDRIFEPF FTTKGVGQGT GLGLSQVFGF AKQSGGEVKV ESEVGRGTTF ALYLPRAEKG
EGGVEDAVPP DAVVDGRGTC VLVVEDNRDV GTFSTQTLQE LGYGTHWVAN ADEALAALAE
KPDTYDVVFS DVVMPGMNGV EFGREVRRLY PGLPVVLTSG YSHVLAQESD HGFELLQKPY
SVEALSRILR RAASKPRRRR KAAG
|
|---|
| |