Gene Mrad2831_5117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5117 
Symbol 
ID6141185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5439827 
End bp5440423 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID641630824 
Productpolyhydroxyalkonate synthesis repressor, PhaR 
Protein accessionYP_001757757 
Protein GI170751497 
COG category[S] Function unknown 
COG ID[COG5394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.681232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGATA CCGTCAAGGC CACCCAGACC GTCATCAAGA AGTACGCCAA CCGGCGCCTC 
TATCACACCG GCACCTCGAC CTACGTGACG CTGGAGGACC TCGCCACGAT GGTGCAGAAC
GGCGAGGATT TCGTCGTCTA CGACGCGCGC ACGGGCGACG ACATCACCCG CTCGGTCCTC
ACGCAGATCA TCTTCGAGCA GGAGAACAAG GCCGGCGCCG AGAACCTGCT CCCGGTGGCG
TTCCTGCGCC AGCTGATCCG CTTCTACGGC GACAGCATGC GCACGATGGT GCCGAGCTTC
CTCGAATTCT CGATGGCGAA TTTCGCCAAG GACCAGGACG GCCTGCGCGA GAAGTTCGCC
CAGAGCTTCG GTCCGGCAGC GTTCCAGAAC GCCATCGAGC AGCAGGTGCG CACCAACATG
AACTTCTTCG GCGACGCCAT GAAGATGTTC ACGGGCTTCG CGCCGCCCGC GCCCGGAGCC
CAGCCGACGG CGCCGGCCCC GACACAGTCC GCGCAATACG GGGGCGGCGA GCTGGACGAT
CTCAAGCGCC AGATGCTGGA GATGCAGCAG CGCCTGGAGG CGCTCGCGAA AAAGTAA
 
Protein sequence
MADTVKATQT VIKKYANRRL YHTGTSTYVT LEDLATMVQN GEDFVVYDAR TGDDITRSVL 
TQIIFEQENK AGAENLLPVA FLRQLIRFYG DSMRTMVPSF LEFSMANFAK DQDGLREKFA
QSFGPAAFQN AIEQQVRTNM NFFGDAMKMF TGFAPPAPGA QPTAPAPTQS AQYGGGELDD
LKRQMLEMQQ RLEALAKK