| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5090 |
|---|
| Symbol | |
|---|
| ID | 6141158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5409292 |
|---|
| End bp | 5410623 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641630797 |
|---|
| Product | citrate carrier protein |
|---|
| Protein accession | YP_001757730 |
|---|
| Protein GI | 170751470 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3493] Na+/citrate symporter |
|---|
| TIGRFAM ID | [TIGR00783] citrate carrier protein, CCS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.59557 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00122276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAACG GGCGCGCGGC CCGGTTCTGG CCGGACGTCT GGTGGCGCCT GATCGACTTC
AAGATCGGCA TCATACCGCT CCCGATCTTC GTCATTCTGG CGATCCTCCT CACCGTCCTG
GTTCAGGAGG GCGAGATCAA GCCCGACGGG CCGACCATGA TCGCCGTGCT GGTGATGGGC
GGCTTCACCT GCGCGGAGAT CGGCAAGCGG ATCCCCATCC TGAAGAACAT CGGTGCCGGC
GCGATCTTCG CGACCTTCAT CCCGTCGGCG CTGGTCTACT ACGCGCTGGT GCCGCCGCAG
ATGGTGAAGG CGATCACCGA TTTCACCAAG TTCACCAACT TCCTCTACAT CTACATCGCC
ACGATCATCG TCGGCTCGAT CCTCGGCATG GACCGCGAGG TCCTGATCAA GGGCTTCCTC
AAGATCTTCG CGCCGCTCGC CCTCGGCTCG GTGGCGGCGG CCCTGGTCGG CACGCTGGTC
GGCACGCTGC TCGGCCTCGG CCCCTACAAG ACGTTCTTCT TCATCGTCGT GCCGATCATG
GCCGGCGGCG TCGGGGAGGG GGCGATTCCG CTCTCCATCG GCTACGCGGC GATCCTCGGC
CTGCAGCAGG GCGTGGTCTT CGCCCAGGTG CTGCCGCCGG TGATGCTGGG CTCCCTGACC
GCGATCATCC TGTCGGGAGC CCTGAACTCC GTCGGCAAGC GCTACCCGCA CCTCACCGGC
GAGGGCCGTC TCCAGCCCGA TTCCGACGGC ATCAAGTCGA GCGACGCCCA GGCCAGGGCC
GAGGCCGCCA AGGGCCAGAT CGACCCCGCG ACGATCGGCG CGGCCGGGCT CACGGCGATC
ACCCTCTACC TGCTCGGTGT CATGGCCCAT CACCTCGTCG GCCTGCCGGC GCCGGTGGCG
ATGCTGTTCC TCGCCGTCCT GGCGAAGCTC GCCAGCGCGG TGTCGCCCCA CCTCCAGGCC
GGCGGCTTCG TCGTCTACAA GTTCGTGCAG GTCTCGATGA CCTACCCGCT GCTCTTCGCC
ATCGGCGTGG CGCTCACCCC CTGGCACGAG CTGATGGCCG CCTTCACCCT GGTCAATCTG
ATCACGATCG TGTCGACCGT CGTGACGCTG ATGGCCGTCG GCTTCTTCGT CGGCCGCTGG
CTCGGGATGT ACCCGATCGA GACCGCCATC GTGAACGCCT GTCACAGCGG TCAGGGCGGC
ACCGGCGACG TGGCGATCCT CACGGCGGCG AACCGCATGG CGCTGATGCC CTTCGCGCAG
ATCGCCACCC GCATCGGCGG CGCGCTGACC GTGACCGGCA CGATCGTCGC CATGAAGTGG
ATCGGTGCCT GA
|
|---|
| Protein sequence | MENGRAARFW PDVWWRLIDF KIGIIPLPIF VILAILLTVL VQEGEIKPDG PTMIAVLVMG
GFTCAEIGKR IPILKNIGAG AIFATFIPSA LVYYALVPPQ MVKAITDFTK FTNFLYIYIA
TIIVGSILGM DREVLIKGFL KIFAPLALGS VAAALVGTLV GTLLGLGPYK TFFFIVVPIM
AGGVGEGAIP LSIGYAAILG LQQGVVFAQV LPPVMLGSLT AIILSGALNS VGKRYPHLTG
EGRLQPDSDG IKSSDAQARA EAAKGQIDPA TIGAAGLTAI TLYLLGVMAH HLVGLPAPVA
MLFLAVLAKL ASAVSPHLQA GGFVVYKFVQ VSMTYPLLFA IGVALTPWHE LMAAFTLVNL
ITIVSTVVTL MAVGFFVGRW LGMYPIETAI VNACHSGQGG TGDVAILTAA NRMALMPFAQ
IATRIGGALT VTGTIVAMKW IGA
|
|---|
| |