| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_5080 |
|---|
| Symbol | |
|---|
| ID | 6141148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 5397039 |
|---|
| End bp | 5398055 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641630788 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001757721 |
|---|
| Protein GI | 170751461 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0100577 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC CCCTCCTCGA CGTCCGCGAC CTCGCGGTCG CCTTCGACAC CGACGGCGGC
GCGGTCCACG CGGTCAACGG CGTGTCCTAC ACCCTGCACG AGGGGGAGAC GCTGGGGATC
GTCGGCGAGT CGGGCTCCGG CAAGAGCGTG CACGTGCTCG CCATGTTGGG CCTGATCCCG
CGCCCGCCCG GCCGCATCAC CGGCGGGCAG GTGCTGTTCG AGGGCCGCGA CCTCCTCGCC
CTGAAGGAGC GGGAACTCCG AAAGATCCGC GGCGGCGCGA TCGGCTTCGT CTTCCAGGAC
CCGATGAGCT CGCTCAACCC CGGCATGACC GTGGCGGCGC AGATCGTCGA GCCCCTGCGC
ATCCATCTGG GCCTCGACGC CCGCGCGGCC CGCGCCCGGG CGAAGGACCT GCTCGATCTC
GTGCGCATCC CGAACGCGGC CGCCCGCCTC GACCAGTACC CGCACGAGTT CTCCGGCGGC
CAGCGCCAGC GGGTCATGAT CGCCATCGGT CTCAGCTGCC GCCCGAAGCT GCTCATCGCC
GACGAGGCGA CCACCGCCCT CGACGTCACC GTCCAGGCCG AGATCGTCGC CCTGGTGCAG
GAGCTGAAGC GCGAGCTCGG CATGGCGATC ATCTGGATCA CCCACGATCT CGGCGTGGTG
GCCGGCATCA GCGACACCGT GCAGGTGATG TATGCCGGCC GGATCCTGGA ACGCGGCCCG
GTCGACGACA TCTTCTCGGA TCCGCGCAAC GCCTACACGC TGGGGCTGCT GCGCTCCCTG
CCGGACCTGT CCAGCGGCCG GGCCGGGCGG CGGCGCCTGC ACCAGATCGA GGGCGCGCCG
CCGGACATGC GCCACCCGCC GCCGGGCGAT CCCTTCGCGC CGCGCAACGC CTACGCCACA
CCCCGCTGCC GGGCCGAGAT GCCGCCCCTG GCGCAGGCGC CCGGTGCCGC TCCGGGCCAC
CTCGTCGCCG CCTGGTACGA CCTGCCGAAG CTCCTGAGCC GGGAGGCCGC ACGATGA
|
|---|
| Protein sequence | MTKPLLDVRD LAVAFDTDGG AVHAVNGVSY TLHEGETLGI VGESGSGKSV HVLAMLGLIP
RPPGRITGGQ VLFEGRDLLA LKERELRKIR GGAIGFVFQD PMSSLNPGMT VAAQIVEPLR
IHLGLDARAA RARAKDLLDL VRIPNAAARL DQYPHEFSGG QRQRVMIAIG LSCRPKLLIA
DEATTALDVT VQAEIVALVQ ELKRELGMAI IWITHDLGVV AGISDTVQVM YAGRILERGP
VDDIFSDPRN AYTLGLLRSL PDLSSGRAGR RRLHQIEGAP PDMRHPPPGD PFAPRNAYAT
PRCRAEMPPL AQAPGAAPGH LVAAWYDLPK LLSREAAR
|
|---|
| |