Gene Mrad2831_5069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5069 
Symbol 
ID6141137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5385127 
End bp5386011 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content71% 
IMG OID641630777 
Product5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 
Protein accessionYP_001757710 
Protein GI170751450 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0176479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCT TCCGGCACGG CCCGAGCGGC GACGAGAAGC CCGGCCTCGT GGATGCCAGC 
GGGGGGCTGC GCGACCTGTC GGGCATCGTG CGCGACATCG CCGGGCCGGC CCTCGCGCCC
GACTCGCTCG CGCGGCTGCG CGCGCTGGAT CCCGAGACCC TGCCGAAGCT GCCTCCGGAC
GTGCGCCTCG GCCCCTGCGT CGGCGGCACC CGGAACGTCG TCGCCATCGG CCTGAACTTC
GCCGATCACG CCGCCGAGAC CGGCTCGCCG ATCCCCGCGG AGCCGATCAT CTTCAACAAA
GCCCCGTCCA GCCTGTGCGG GCCGAACGAC ACGGTCATCA TCCCGAAGGG GTCGCACAGC
ACCGACTGGG AGGTGGAGCT CGCCGTGGTG ATCGGGCGGC GCGCCAGCTA CGTCCACGCC
AACGAGGCGC TGAGCTACGT GGCGGGCGCC TGCATCTGCA ACGACGTCTC CGAGCGCGAA
TGGCAGATGA ACCGCGGTCC GACCTGGACG AAGGGCAAGA GCGCGCCGAC CTTCGGCCCC
CTCGGGCCCT GGCTGGTGAC GCTCGACGAG ATTCCCGACC TGAAGAACCT CGCCATGAGC
CTCGACGTGA ACGGCGAGCG CCGGCAGACC GGCTCGACCG CCACGATGAT CTTCGACGTT
CCCCAGCTCG TCGCCTACAC GTCGCACTTC ATGCTGCTGG AGCCGGGCGA CGTGATCACC
ACCGGCACGC CGCCGGGCGT CGGCCTCGGC ATGAAGCCGC CGCGCTACCT CAAGGCCGGG
GACGAGATGG TCCTGCGCAT CGACCGGCTC GGCGAGCAGC GCCAGAAGGT CATCGCGTTC
GACGACTGGA CCGCCAAGGT CTCGGCCGGG GAGCCGACGG ACTGA
 
Protein sequence
MKLFRHGPSG DEKPGLVDAS GGLRDLSGIV RDIAGPALAP DSLARLRALD PETLPKLPPD 
VRLGPCVGGT RNVVAIGLNF ADHAAETGSP IPAEPIIFNK APSSLCGPND TVIIPKGSHS
TDWEVELAVV IGRRASYVHA NEALSYVAGA CICNDVSERE WQMNRGPTWT KGKSAPTFGP
LGPWLVTLDE IPDLKNLAMS LDVNGERRQT GSTATMIFDV PQLVAYTSHF MLLEPGDVIT
TGTPPGVGLG MKPPRYLKAG DEMVLRIDRL GEQRQKVIAF DDWTAKVSAG EPTD