Gene Mrad2831_5008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5008 
Symbol 
ID6141076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5329573 
End bp5330376 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID641630716 
Producttwo-component response regulator 
Protein accessionYP_001757649 
Protein GI170751389 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0784] FOG: CheY-like receiver
[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.16011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0859661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACAT CGCAACTCGT GGTACAGCAC CTGCCGTACC TGCGCCGCTA CGCGCGCGCG 
CTCACGGGTA GCCAAGTGGC GGGTGACGCG TACGTCGCCG CCACCCTGGA GACCCTCGTC
AACGAGCCGG ACACGCTCGG TCGCAGCACC AACATCAAGG CCGACCTGTT CCGCGTCTTC
ACGCGGATCT GGAACTCGCT CTCGGTCAAC GGCCGCAGCG AGCAGGTCCA GCACGACCTG
CCTGCGGAGG TGCGCCTCGG TCAGATCACG CCGCTGCCGC GCCAGGCCTT CCTGCTCTCC
TGCCTCGAGG GCTTCTCGGA GGAGGACGCG GCCATCATCC TCGGCGTGGA CGTGTCCGAG
GTTCGCGACC TCGTCGACGA GGCCGGCCGC GAGCTCGCCG CCGACATGGC GACCGAGATC
CTCATCATCG AGGACGAGCC CCTGATCGCG ATGGATCTGG AGGCTCTGGT CGAGGGTCTC
GGCCACAACG TCATCGGCGT TGCCCGCACC CGTACCGAGG CGATCAAGAT CGCCGGGGAG
GGCAAGCGTC CCGGCCTGAT CCTGGCCGAC ATTCAGCTCG CCGACGGCTC CTCCGGCCTC
GACGCGGTGA ACGACCTCCT GAAGTCCTTC GAGGTGCCGG TGATCTTCAT CACCGCCTAT
CCGGAGCGCT TCCTCACCGG CGAGCGGCCC GAGCCGGCCT TCCTCATCGC CAAGCCGTTC
CAGCCCGCCA ACGTCTCGGC GGTGATCAGC CAGGCGCTGT TCTTCCAGCA GACCGCCCGT
CGGCGCGAAG CCAAGACGGC CTGA
 
Protein sequence
MSTSQLVVQH LPYLRRYARA LTGSQVAGDA YVAATLETLV NEPDTLGRST NIKADLFRVF 
TRIWNSLSVN GRSEQVQHDL PAEVRLGQIT PLPRQAFLLS CLEGFSEEDA AIILGVDVSE
VRDLVDEAGR ELAADMATEI LIIEDEPLIA MDLEALVEGL GHNVIGVART RTEAIKIAGE
GKRPGLILAD IQLADGSSGL DAVNDLLKSF EVPVIFITAY PERFLTGERP EPAFLIAKPF
QPANVSAVIS QALFFQQTAR RREAKTA