Gene Mrad2831_5001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_5001 
Symbol 
ID6141069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp5323404 
End bp5324144 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content69% 
IMG OID641630709 
Product3-oxoacid CoA-transferase, A subunit 
Protein accessionYP_001757642 
Protein GI170751382 
COG category[I] Lipid transport and metabolism 
COG ID[COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit 
TIGRFAM ID[TIGR02429] 3-oxoacid CoA-transferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0462314 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0019273 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGG TCTACACGGA TGCCGCCGCC GCCCTGGCCG GCCTCCTGCA CGACGACATG 
ATGGTGATGT GCGGCGGCTT CGGCCTCTGC GGCATCCCCG ACGAGCTGAT CGAGGCGGTG
CGCCTCTCGG GCGTCAAGGG CCTCACGGTC GTGTCGAACA ATGCCGGCAT CGACGGGGTC
GGCCTCGGCA AGCTCCTGGA TACCCGCCAG GTCGCCAAGA TGATCTCGTC CTACGTGGGC
GAGAACAAGG AGTTCGCCCG CCAGTATCTC GGCGGCGAGC TGGAGATCGA GTTCAACCCG
CAGGGCACGC TGGCGGAGCG GATCCGCGCC GGCGGCGCGG GCATCCCGGC CTTCTTCACC
AAGACCGGCG TCGGCACCAA GGTCGCCGAG GGCAAGGAAG TCCGCGAGTT CGACGGCGAG
CAGTACGTGA TGGAGCGCGG CCTGTTCGCC GACCTCGCCC TGGTCCACGC CCACACCGGC
GACACCGAGG GGAACCTGCG CTACCGGATG ACCGCCCGCA ACTTCAACCC GATGATGGCC
ACCGCCGCCA AGATGACGGT GGCGCAGGTC GAGCACCTCG TGAAGCCCGG CGAGATCGAC
CCGGACACGA TCCACACGCC CGGCATCTTC GTGAAGCGGA TCATCGACGT CGGGCAGCGC
GACAAGCGCA TCGAGCAGCG CACTACGCGC AAGCGCGGCG ACAGCACCCC GGCCGCGGCG
GCCGGCGGCG GCACGCACTG A
 
Protein sequence
MKKVYTDAAA ALAGLLHDDM MVMCGGFGLC GIPDELIEAV RLSGVKGLTV VSNNAGIDGV 
GLGKLLDTRQ VAKMISSYVG ENKEFARQYL GGELEIEFNP QGTLAERIRA GGAGIPAFFT
KTGVGTKVAE GKEVREFDGE QYVMERGLFA DLALVHAHTG DTEGNLRYRM TARNFNPMMA
TAAKMTVAQV EHLVKPGEID PDTIHTPGIF VKRIIDVGQR DKRIEQRTTR KRGDSTPAAA
AGGGTH