Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4923 |
Symbol | |
ID | 6140991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 5243682 |
End bp | 5244362 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641630633 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001757566 |
Protein GI | 170751306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00235984 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCCGCACT GGCTCGACCT CATGCTCCAG TCGCTGGGGC CGCTGCTCGC GGCCGGCCTG CGCTTCACGG TGCCGCTGAC GCTCATCGCC TTCGCGCTCG GCCTCGCGCT GGGACTCGGC ACCGCCCTCG TGCGGCTGTT CGCGCCCCGG CCGCTGGCGG CGTTGGCGTG GCTCTACGTG TGGATCTTCC GGGGCACGCC GCTCCTCGTG CAGCTGTTCG TGATCTTCTA CGGCCTGCCG AGCACCGGCA TCCTGATCGA CGCCTTCCCG GCCGCCGTGA TCGGGTTCAC CCTCAACGTC GGCGCCTACA CGTCCGAGAT CGTCCGCGCC GCCATCGCCT CCATCCCGAA GGGGCAGTGG GAGGCGGCCT ACGCCACCGG GATGACGCCG GTCCAGGCCC TGCGCCGCAC GATCCTGCCC CAGGCGGCGC GGGTGGCGGT GCCGTCGCTG GCGAACTCCT TCATCGCGCT GGTGAAGGAC ACCTCGCTCG CGGCCGCCAT CACGGTGCCG GAGCTGTTCC AGGCGGCCCA GCGCATCGTC GCCGTCACCT ACGAGCCGCT GATCCTCTAC ATCGAGGTGG CGCTGATCTA CCTCGTCCTG TCGACGCTGC TGTCCTGGCT CCAGACGCTG CTGGAGCGGC GCCTCGGGCG CTACGGCGGC TACCTGGAGG CCCGCGCGTG A
|
Protein sequence | MPHWLDLMLQ SLGPLLAAGL RFTVPLTLIA FALGLALGLG TALVRLFAPR PLAALAWLYV WIFRGTPLLV QLFVIFYGLP STGILIDAFP AAVIGFTLNV GAYTSEIVRA AIASIPKGQW EAAYATGMTP VQALRRTILP QAARVAVPSL ANSFIALVKD TSLAAAITVP ELFQAAQRIV AVTYEPLILY IEVALIYLVL STLLSWLQTL LERRLGRYGG YLEARA
|
| |