| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4873 |
|---|
| Symbol | |
|---|
| ID | 6140941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 5204934 |
|---|
| End bp | 5206319 |
|---|
| Gene Length | 1386 bp |
|---|
| Protein Length | 461 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641630583 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001757516 |
|---|
| Protein GI | 170751256 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.152026 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGC ATGCTGAGCG CATAGTCCTC GAATACGGCT GTCTCTTTCA GGAAGGTTGC
TTTCTCCGGG TGCCAAGTCC GCTCTTTCGA CTTGAGGTTA TCGAGGCGCG ACGCAACGCG
TGGCTGGGCG AGGCGCAGAT CATCCAGCCT CTGCCGGTCC GCATCGTGGC CCTGGCCTGC
GTGGTCATGG TGGCGGCGTT CGGCCTCTAT GCCTGGCAGG GCACCTACAC GCGCCGCATC
CACGCCGTCG GTCTGCTCGC GCCCGATATC GGGCTGATCA GCCTCGCCAG CCCGGTGGCG
GGGCGCGTCG GCTCGACCGG CGTCCGCGAG GGCGACAAGG TCGCCCGCGG GCAGCTCCTG
TACACGATCG ACCTCGATGC CGTGTCGGCG AGCGGCCCCA CGCAGGAGCG CGTGATCGCC
GAGCTGGAGC GGCAGCGCCA GAGCGTGGAG CGGCAGCGGG CCGCCCGGGC CGATCTCGCC
GGCACGGAGC GGCAGGCGCT GCGCGAGCAG GTGGCGAATC TGAGCGAGCA GTCGGCCCAG
CTCGCCAAGC AGATCGACCT GCAGGACAAG CTGGTTCCGC CGCTCCGGGC GCGGGTCGAG
GAACTCGCCG ACGCCGTGGC GCGCGGCTAC GCCCGCGCCG CCGACTTCCA GAGCCAGAAC
TACCTCTACA TGCAGGCGAG CGCGCAGCTC GCCCAGTTCC AGCAGAGCCG CCTCCAGATC
GACGGCAAGC TCGCCGACAC GCGATCCCAG CTCGCCGCCT ACGACGACCG GCTGGCCCGC
GACCTCGCCG ACCTCGACCG GACCGCCGCC CAGCTGGCGC AGCAGAAGGC CGAGAGCGAG
GCGCGCCGCG CCATCGAGGT CCGGGCGCCG GAGGCCGGGA CCCTGACGTC GATCCGCGCG
CAGGTCGGCC AGACCGTGGC GGCCGGGGCG ACGCTGCTGA CCCTGCTGCC GAGCGCCGGG
CGCCTCCAGG CCAACCTGTT CGTGGATTCG TCGGCCATCG GCTTCGCCGA GGCCGGCGCG
CCGGTGATGC TGCGCTACGC CGCCTTCCCG TTCCAGCGCT TCGGCCTGCA CCGCGGCGTC
GTCACCGAGG TGACGCGGGC GCCGCTGGGA AGCGACGACG CGCCCGATTT CGCGCGGCGC
GCGGCCGCCC GGGGCGAGGG GACGGACCTC TACCGCATCG TGGTCCGGCC CGATTCCGAC
ACCGTGCTGG CCTACGGCGA GCGGCGCAGC CTCGAGGCGG GCATGCGGGT CGAGGCCGAC
ATCGCCCTGG AGAAGCGGTC GCTGTACCGC TGGCTGCTCG ATCCCGTGGC GCATGTCCGG
GAGAGCCTCG CCCTCGTCAC GCGCGGCGGC CTCGACGCCC TGCCGGTCCG GAAGGCCGCG
CCGTGA
|
|---|
| Protein sequence | MAAHAERIVL EYGCLFQEGC FLRVPSPLFR LEVIEARRNA WLGEAQIIQP LPVRIVALAC
VVMVAAFGLY AWQGTYTRRI HAVGLLAPDI GLISLASPVA GRVGSTGVRE GDKVARGQLL
YTIDLDAVSA SGPTQERVIA ELERQRQSVE RQRAARADLA GTERQALREQ VANLSEQSAQ
LAKQIDLQDK LVPPLRARVE ELADAVARGY ARAADFQSQN YLYMQASAQL AQFQQSRLQI
DGKLADTRSQ LAAYDDRLAR DLADLDRTAA QLAQQKAESE ARRAIEVRAP EAGTLTSIRA
QVGQTVAAGA TLLTLLPSAG RLQANLFVDS SAIGFAEAGA PVMLRYAAFP FQRFGLHRGV
VTEVTRAPLG SDDAPDFARR AAARGEGTDL YRIVVRPDSD TVLAYGERRS LEAGMRVEAD
IALEKRSLYR WLLDPVAHVR ESLALVTRGG LDALPVRKAA P
|
|---|
| |