| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4788 |
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| Symbol | |
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| ID | 6140856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 5105538 |
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| End bp | 5108726 |
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| Gene Length | 3189 bp |
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| Protein Length | 1062 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641630498 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001757431 |
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| Protein GI | 170751171 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.654766 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCGC GCTTCTTCAT CGAGCGGCCG GTCCTGGCCA ACGTGCTGGC CCTGGTCATG
GTGCTGATCG GCGCGGTGTC GCTGCTCAAC CTGCCGGTGT CCCAGTATCC CAACGTCGTG
CCGCCGACGG TCCAGGTCAC CACCCGCTAT CCGGGCGCGA GCGCCCGCAC GGTGGTCGAC
ACGGTGGCGC TCCCGATCGA GCAGCAGGTC AACGGCGTCG AGGGCATGCT CTACATGCAG
TCGACCAGCG CGAGCGACGG CACCTACACG CTCACGGTCA CCTTCGCGAT CGGGACGGAC
GGCGACCAAG CCCAGGTGCT GGTGCAGAAC CGGGTCGCGA TCGCGATGTC GTCGCTGCCG
CAGGCGGTCC AGGTTCAGGG CGTCACGACC CAGAAGAAAT CCACCGCGGT CCTGCAATTC
GTGACACTGT CGGCCAGCGA CGGGAAGTTC GACAGCCTGT TCCTGTCGAA TTACGGCGTC
ATCAACGTGC AGAACGAGCT GGCCCGGCTG CCCGGCGTCG GCAACGTCAC GGTGTTCGGC
GCGGGCCAGT ACGCGATGCG GATCTGGCTC GACCCCGACC TCGTCCAGGC CCGCGGCCTC
ACCCCCGACG CCATCATCAA CATCGTGCAG CAGCAGAGCC AGGAGGTCAC CGCGGGCGCC
GTCGGGATGC CGCCGGTCCC GGCCGGACAG GACTTCCAGT ACACCCTCAA CGTCAACGGG
CGGCTCAACA ACGCCCCGGA CTTCGAGAAC ATCGTCATCA AGGCGGACGC GCAGGACGGG
GGCCGCATCA CCCGCCTGCG CGACGTCGGC CGGGTCGAGC TCGGCGCGCA GACCTACAGC
CAGTCCTTCA CGCTGAACGG GCAGCCCGCC GCCGGCATCG GCATCTACCA GCTGCCCGAG
GCGAACGCGC TGACGGTGGC GAACGCGGTC CGCGCCCGGA TGGCCGAGCT CGCGAAGACC
TTCCCGTCGG GCCTCGTCTA CGCCATCCCG TTCGACACGA CGGAGTTCGT GCAGGCCTCG
ATCCACGAGG TCTACAGGAC GCTGTTCGAG GCGGCCGTGC TGGTCCTGAT CGTCATCCTG
GTCTTCGTCC AGGACTGGCG CGCCATGCTG GTGCCGGCGA CGACGGTGCC GGTGACCATC
ATCGGCGCCT TCGCGGCCAT GGCGGCGATG GGCTTCAGCG TGAACCTCTC GACGCTGTTC
GCCATCGTGC TGGCCATCGG CATCGTGGTG GACGACGCCA TCGTGATCGT CGAGGGGGTG
TCCCACCACA TCGACGAGGG CCTCTCGCCG CGGGCGGCGG CCGAGCAAGC GATGGAGGAG
CTGTTCGGCC CGATCATCGG CATCACCCTG GTGCTCATGT CGGTGTTCGT GCCGGCCGCG
TTCCTCCCCG GCCTGACCGG GCAGCTCTAC AAGCAGTTCG CCCTGGTGAT CGCCGCGACC
GCGCTGATCA GCGCGATCAA CGCCGCCACC CTGAAGCCGA CCCAGTGCGC CCTGTGGCTG
CGCAAGCCGG TGCCGCCGGA GAAGCGGAAC GTGTTCTACC GCGGCTTCAA CCGCGTCTAC
GGCGTCCTGG AGAACGGGTA CGCCCGGCTG ATCGCCAGCA TGGTCCGGCG CAGCGGCCTG
ATGGTCGCCG CGGCACTCCT GCTGATCGGT CTCGCCGGAT GGGGGCTCAC CCGCCTGCCC
ACCGCCTTCC TGCCCACCGA GGATCAGGGC TACGTCCTGA TCGGCGCGCA GCTGCCGGAC
GGGGCCTCGA AGGAGCGCAC CGACGCCGTG ATGCAGCGGA TCAGCGCCCA GGCGAAGGCG
ACGCCGGGCG TCGACAACGT CCTCTCGATC AGCGGCATCT CGGTCCTCGA CTCGAACGCC
ACCCTGCCCA ATGCCGGCGT CGCCTACGTG GTTCTCAAGA ACTGGGACGC CCGCGCCGGG
GAGAAGGGCC AGGATCTGCG CAGCCTCTAC GAGCGCTTCA ACACGATGCT GGCGGGCGTC
GAGGACGCCG ACACCTTCGT GCTGATCCCG CCGCCGATCC AGGGCATCGG CAACGCCAGC
GGCTTCACCA TGCAGATCGA GCTGCGCAAC GGCGACTTCG ACTACCCGCT GCTGGAGAGC
CTCGCCCGGA CGATCGTCGC CGACGGGAAC GCGCAATCCG GGCTGCGGAA GCTCAACACC
TCGTTCCGGG CCGGCGTGCC GCAGATCGCG ATCGCGGTGG ACCGGGTCAA GGCCGAGGCC
CTCGGCGTGA CGGTCGGTCA GGTCTTCTCG ACGCTCTCGA GCTACGTGGG CTCGTCCTAC
GTCACGCAGT TCAACAAGTT CGGCCGGACC TTCCAGGTCT ACGTGCAGGC CGCGCCCGAC
TACCGGCTCC GTCCCGAGGA CGTCGAGAAC CTGAAGGTGC GCGCCGGCAA CGGCGTGATG
GTGCCCCTCG GCACCGTCGT GGAGATCAGG ACCGTGCAGG GCCCGTCCCT GATCAGCCTG
TACAATCTCT ACCCGACGGC GACGATCGTC GGCGGGGCGG CACCGGGCTT CAGCTCCGGG
CAGGCGCTGG ACCTGATGCA GCAGATCGCC GCCAAGGTGC TGCCGCCGGG CACGGGCTAC
GACTGGACGG CGATGTCGTA CCAGGAGAAG GCGGTCGGCG CGCAGATCTA CCTCGTGTTC
GGGCTCGCCA TCCTCCTCGT CTACCTGGTC CTGGCCGGCC AGTACGAGAG CTGGATCCTG
CCGCTGGCGG TCCTGCTCGG CGTGCCGCTG GCGCTGCTGG GCACGGTCGG GGCGCTGCTG
CTGCTCGGCG TCGCCAACAA CCTCTACACG CAGATCGGCC TGATCCTGCT GATCGCGCTG
GCGAGCAAGA ACGCCATCCT GATCGTCGAG GTCGCCCGCG AGAAGCGGCA GTCCGGCCTC
GACATCGCGG CCGCCGCCGT GGAGGCGGCG CGACTGCGCT TCCGCCCGAT CCTGATGACC
TCGTTCGCCT TCATCCTCGG CGTCCTGCCC CTCGTCACCG CCTCCGGGGC CGGGGCCGCG
GCGCGCAAGT CCATCGGCAT CACGGTGTTC AGCGGCATGC TAGCCTCGAC CTGCCTGGCG
GTGCTGTTCG TCCCGTCCTT CTACGTGATC CTGCAGCGCC TCGAGGAGCG CCGCGCGCGC
GGGCGGCAGC CCGGGCCGGT CGCCGCCCCG CCCGCGGCCG GGACAGCCCC CGAGACCGGT
CCCGCGTGA
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| Protein sequence | MISRFFIERP VLANVLALVM VLIGAVSLLN LPVSQYPNVV PPTVQVTTRY PGASARTVVD
TVALPIEQQV NGVEGMLYMQ STSASDGTYT LTVTFAIGTD GDQAQVLVQN RVAIAMSSLP
QAVQVQGVTT QKKSTAVLQF VTLSASDGKF DSLFLSNYGV INVQNELARL PGVGNVTVFG
AGQYAMRIWL DPDLVQARGL TPDAIINIVQ QQSQEVTAGA VGMPPVPAGQ DFQYTLNVNG
RLNNAPDFEN IVIKADAQDG GRITRLRDVG RVELGAQTYS QSFTLNGQPA AGIGIYQLPE
ANALTVANAV RARMAELAKT FPSGLVYAIP FDTTEFVQAS IHEVYRTLFE AAVLVLIVIL
VFVQDWRAML VPATTVPVTI IGAFAAMAAM GFSVNLSTLF AIVLAIGIVV DDAIVIVEGV
SHHIDEGLSP RAAAEQAMEE LFGPIIGITL VLMSVFVPAA FLPGLTGQLY KQFALVIAAT
ALISAINAAT LKPTQCALWL RKPVPPEKRN VFYRGFNRVY GVLENGYARL IASMVRRSGL
MVAAALLLIG LAGWGLTRLP TAFLPTEDQG YVLIGAQLPD GASKERTDAV MQRISAQAKA
TPGVDNVLSI SGISVLDSNA TLPNAGVAYV VLKNWDARAG EKGQDLRSLY ERFNTMLAGV
EDADTFVLIP PPIQGIGNAS GFTMQIELRN GDFDYPLLES LARTIVADGN AQSGLRKLNT
SFRAGVPQIA IAVDRVKAEA LGVTVGQVFS TLSSYVGSSY VTQFNKFGRT FQVYVQAAPD
YRLRPEDVEN LKVRAGNGVM VPLGTVVEIR TVQGPSLISL YNLYPTATIV GGAAPGFSSG
QALDLMQQIA AKVLPPGTGY DWTAMSYQEK AVGAQIYLVF GLAILLVYLV LAGQYESWIL
PLAVLLGVPL ALLGTVGALL LLGVANNLYT QIGLILLIAL ASKNAILIVE VAREKRQSGL
DIAAAAVEAA RLRFRPILMT SFAFILGVLP LVTASGAGAA ARKSIGITVF SGMLASTCLA
VLFVPSFYVI LQRLEERRAR GRQPGPVAAP PAAGTAPETG PA
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