| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4439 |
|---|
| Symbol | |
|---|
| ID | 6140504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 4720856 |
|---|
| End bp | 4722829 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641630152 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_001757088 |
|---|
| Protein GI | 170750828 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTC CTAGACATCT GCTCTCGTTA CTGATCGCGT CGTTGACCGC ATCCGCCCGC
GGCCTGACCG CCACGCGTCA GCTCGCGGAG CTGCAGAAGC AGGTCCCGAG CCTCTACGGC
CTGCTCTCGG TCAATGCCGG CGCCCTCGCC GTGACGCATT ACGGTCTGGC GCCCGCTTTC
CTGACGCTCG GCATCCCGGC CGTCGTGATC TCGCTGTGCG TGGTGCGGGC GGCGCACTGG
CTGCGGCTGC GGCCCGAGAC GTTCGGCGAA GCGCGGGCGT CCCGTCACCT GCGGCTGACC
ACGGTGCTCA CGGCCTTCTT CTCGGTCGCC TTCGTGATCT GGGCGATGGT CCTGAACCGG
TACGGCGGCC CCTACGAGCA GGGCCACGTG GCGATCTTCG TGGCCGTCAC GGTGATCGCC
TGCATCTTCT GCCTGACGCA CCTGCCGGTC GCGGCCTTCC TGGTGACCGG CATCGTCATG
AGCGTGTTCC TGTTCTGCTG CGTGACCAGC GGGAACGACG TCTTCCTGGC CATCGCCGCC
AACACGGCCT TCGTCACGGC GGTGATGGTC CGCATCCTCA ACACCAACTA CCGGGCCTTC
GTCGACCTCG TCGCGTCCCA GGCCGTGGCG AGCCGGCTCT CGGAGGAGAA CGCGCGCCTC
GCCCAGACGG ACAGCCTGAC CGGCCTGCCC AACCGGCGCT ACTTCTTCCA GAAGCTCGAC
GAGGCGATCC GGTCGTCCGC GGGAACGGAG ACACCCTTCG CCCTGGCGAT CTTCGACCTC
GACCGCTTCA AGCCGATCAA CGACACCTAC GGGCACAATG TCGGCGACCG GGTCCTGGCG
GAGGCCGGCC GGCGCCTCGC GGGCTTCGCG GGCGCCGACG CGGTGGTGAC GCGGCTGGGG
GGCGACGAGT TCGGCGTGCT GCTGCGCGCG CCGGATTCGG CCGCGGCGGC GCTCGCCTTC
TGCGACGGCG TCTGCACGGC GCTGCAGCAG CCGATCCAGA TCGGCGACAT CCGGGTCGTC
ACGGGCTGCT CGGGCGGGCT CGCCCTGCCC TGCCGGATCT CGCACGACGC CGACGCCCTG
TTCGACCGCG CCGACTACGC GCTCTACCAC TCCAAGGAGC AGCGCCGCGG CGCGACGACC
CTGTTCTCGC AGGAGCACAA GGACGCGATC CGCGCCGAGC AGGCGGTGGA GACGGCCCTG
CGGACGGCGG ATCTCGCCGC CGAGATGGTG CTGCACTACC AGCCGGTCCT CGACCTCGAG
ACGGGCCGGA CCGCCTTCGT GGAGGGTCTG GCGCGCTGGA CGAGCCCGAC GCTGGGCCGC
GTCGCGCCGG ACCGGTTCAT CGCGGCCGCC GAGCGCTGCG GCATGATCCA CACGGTGACG
CTCCTGCTCC TGCGCAAGGC GCTCGCCGAC GGCGCGCGGC TGCCGCCCGG GACCGGCCTG
TCCTTCAACC TCTCCGCCCA CGACCTCGCC TCGCCGGAGA CCGTCCTGGC GATCCTGGCG
GCGGTACGGG GCAGCGGCCT CGACCCGCGC CGCCTGACGC TCGAACTGAC CGAGACCGCC
CTGATGCGCG ACTTCGATCA CGCCAAGGCG GCCATCACCA CCCTGCGCAG CCTCGGCATC
AAGATCGCCC TGGACGATTT CGGGACCGGC TATTCCAGCC TGGGCTACGT CCACCGCCTG
CCCCTGGACA AGATCAAGAT CGACCGCGGC TTCATGGCCG ACATCGACAC GGACCGGGGC
TGCAGCCTCG TCTCCGCGAT CCTGGACCTG TGCCGCAACC TCGGCCTCGA CGGGATCGTC
GAGGGAATCG AGACGCAGGC CCAGCTGGAC GTGGCGCGGC GGCACGGCAG CCGCTACGCC
CAGGGCTACC ACATCGGCCG CCCGATGCCC CTCGGCGACC TGCTGGAGCG GCTGGAGCGC
GAGGGCGCGG CGGAAGCAGA GGCAGAGGCC GGCACGGTGC GCCGGAGGGC CTGA
|
|---|
| Protein sequence | MNRPRHLLSL LIASLTASAR GLTATRQLAE LQKQVPSLYG LLSVNAGALA VTHYGLAPAF
LTLGIPAVVI SLCVVRAAHW LRLRPETFGE ARASRHLRLT TVLTAFFSVA FVIWAMVLNR
YGGPYEQGHV AIFVAVTVIA CIFCLTHLPV AAFLVTGIVM SVFLFCCVTS GNDVFLAIAA
NTAFVTAVMV RILNTNYRAF VDLVASQAVA SRLSEENARL AQTDSLTGLP NRRYFFQKLD
EAIRSSAGTE TPFALAIFDL DRFKPINDTY GHNVGDRVLA EAGRRLAGFA GADAVVTRLG
GDEFGVLLRA PDSAAAALAF CDGVCTALQQ PIQIGDIRVV TGCSGGLALP CRISHDADAL
FDRADYALYH SKEQRRGATT LFSQEHKDAI RAEQAVETAL RTADLAAEMV LHYQPVLDLE
TGRTAFVEGL ARWTSPTLGR VAPDRFIAAA ERCGMIHTVT LLLLRKALAD GARLPPGTGL
SFNLSAHDLA SPETVLAILA AVRGSGLDPR RLTLELTETA LMRDFDHAKA AITTLRSLGI
KIALDDFGTG YSSLGYVHRL PLDKIKIDRG FMADIDTDRG CSLVSAILDL CRNLGLDGIV
EGIETQAQLD VARRHGSRYA QGYHIGRPMP LGDLLERLER EGAAEAEAEA GTVRRRA
|
|---|
| |