Gene Mrad2831_4412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4412 
Symbol 
ID6140471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4680332 
End bp4682056 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content74% 
IMG OID641630119 
Productdiguanylate cyclase/phosphodiesterase 
Protein accessionYP_001757061 
Protein GI170750801 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.165306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG ATCCCCTGCC CGCCCGCCCG CCGCTCCGGG ACGCGGGGTT CCCGATCCCG 
CCCGGGCAGG GCGCGGCGCG CGACCCCCTG GTTCCCTATC TCGACGCGGC CCGGCAGGGC
CTCCTGATGA TCGACCGGGC CGGGACGGTC GTGGCGGCGA GCGCGCCGGC GCGGCGGCTC
CTGGAGAGCC TGACGGTCGC GCCGAGGATC GGTGCCGCCG CGCTGCCGCT GCTGCGGGCC
CTGCGGGACG GGAGCGCCCC GGCGCGGCAC GCGACCCTGC GGGCCCTGCG CGGCGCGCTG
GCCCGGCGGC AGCCCGCCCT GTTCGAGGTG CGGCGCCGGG CACACACGGT CCAGGTCGAG
CTCCACCCTC TCGCGGAGGG CGGCTGGGTC GTCACCCTGG AGGACGTCAG CACCCGGAAG
GCCACCGAGG CCCGGGCCGA CGCGATGGCG CGGCTCGACC CGCTCACCGG CCTGCCGAAC
CGCCTGCTCC TGCGCGAGCG CCTCGCCGCA GCGCTGGAGC GGCTCGCGCG CCCGGGCGAG
GGCTTCGCCC TGCTGCTCAT CGACCTCGAC CGGTTCAAGC CGGTCAACGA CACCCTCGGC
CACCCGATCG GGGACGCGCT GCTGGCGACG GTCGCCGACC GCCTGCGCTC GACGGTGCAG
GCCACCGACA CGGTGGCGCG GATCGGCGGC GACGAGTTCG TCATCCTGCA GGCCGGGATC
CGCGACGCGG CCGGCACGCA GGCGCTCGCC CGCCGCGTCG TCGACCTGAT CGGCCGGACC
TACATGGTGG AGGGCCATCT CCTGACGATC GGCGCCAGCG TCGGCGTGGC GCTCGCCCCC
GCGGACGGGA CCGACGCCGA CCGGCTCCTG AAGAACGCCG ACCTCGCCCT CTACCGGGCC
AAGCTCGACG GCCGCGGCAC CTACCGGTTC TTCGAGCCGG AGATGGATGC CCGCATGCAG
GCGCGCCGGA AGCTCGAGCT CGACATGCGC CAGGCGCTGG CCCGGCGGGA ATTCCAGCTG
CACTACCAGC CGCAGATGCA GCTCGCGAGC GGCACGCTGA TCGGCTGCGA GGCCCTGATC
CGGTGGCGCC ATCCCGACCG CGGCCTGGTC TCGCCCCTCG ACTTCATCCC GCTGGCCGAG
GAGATCGGCC TCATCGTCCC GATCGGCGAG TGGGTCGTCC GGCAGGCCTG CCGCGACGCC
GTGACCTGGC CGGACCCCAT GTCGGTGGCG GTCAACGTCT CGCCCGCCCA GTTCAAGAGC
GACCGCCTCG TGGAGACGAT CATCTCGGCC CTGGCGGGTT CGGGGCTGCC GGCGCGGCGG
CTCGAGGTCG AGATCACCGA GGGCGTGCTG CTGCAGGAGA ACGACCGGAC GCTCCAGACC
CTGCACCGGC TGCGGGAGCT CGGCGTTCGC GTCTCCATGG ACGATTTCGG CACCGGCTAC
TCGTCGCTCA GCTACCTGCG CTCGTTCCCC TTCGACAAGA TCAAGATCGA CCGGTCCTTC
GTGAAGGATC TGACCAGCAA GCCCGACGGC GAGGCGATCA TCCGGGCCAT CGCGGGGCTG
GGGAGGAGCC TCGGCATGAC CACCGTCGCG GAGGGCGTCG AGACGTCCGA ACAGATGCAG
CGCATCCGGT TCGAGGGCTG CACCGACGTG CAGGGCTACC TGATCAGCAA GCCCGTTCCC
GCCGAGGACC TGCGCCAGGT CTTCGCCGCC TTCCCGCAGG CCTGA
 
Protein sequence
MRPDPLPARP PLRDAGFPIP PGQGAARDPL VPYLDAARQG LLMIDRAGTV VAASAPARRL 
LESLTVAPRI GAAALPLLRA LRDGSAPARH ATLRALRGAL ARRQPALFEV RRRAHTVQVE
LHPLAEGGWV VTLEDVSTRK ATEARADAMA RLDPLTGLPN RLLLRERLAA ALERLARPGE
GFALLLIDLD RFKPVNDTLG HPIGDALLAT VADRLRSTVQ ATDTVARIGG DEFVILQAGI
RDAAGTQALA RRVVDLIGRT YMVEGHLLTI GASVGVALAP ADGTDADRLL KNADLALYRA
KLDGRGTYRF FEPEMDARMQ ARRKLELDMR QALARREFQL HYQPQMQLAS GTLIGCEALI
RWRHPDRGLV SPLDFIPLAE EIGLIVPIGE WVVRQACRDA VTWPDPMSVA VNVSPAQFKS
DRLVETIISA LAGSGLPARR LEVEITEGVL LQENDRTLQT LHRLRELGVR VSMDDFGTGY
SSLSYLRSFP FDKIKIDRSF VKDLTSKPDG EAIIRAIAGL GRSLGMTTVA EGVETSEQMQ
RIRFEGCTDV QGYLISKPVP AEDLRQVFAA FPQA