| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4406 |
|---|
| Symbol | |
|---|
| ID | 6140465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4673360 |
|---|
| End bp | 4675489 |
|---|
| Gene Length | 2130 bp |
|---|
| Protein Length | 709 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641630113 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001757055 |
|---|
| Protein GI | 170750795 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.684267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0387925 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCC TGCTGGGCTT CGTCGGTTCC GGGCCGCACG CCGCCCGCGC GGAGGAGGCG
GGGGCCGGCC GGGATGTCCA GCTCGGCGAA CTCTCGGTCG AGGGTGCGGC CGCGCCGCGC
GGCCCGATGC CGGCCTATGC CGGCGGTCAG GTGGCGCGGG GCGGGCGCCT CGGCCTGCTG
GGCGATACCG AGACGCAGAA GGCACCCTTC AGCATCGCCA GCTACACCGA CACGCTCATC
CGGGACCGGC AGGCGCGGAC TTTGTCCGAG ACCCTGGTCC TCGACCCGTC GGTGCGCGCC
ACCCAGACCA CGGGGGCGCC GTTCGACTCC TTCTCCATCC GGGGCTTCCC GGCCAACGAG
AACACCAGCG GCGAGGTCGC CTTCGACGGG CTCTACGGCA TCGCCCCGAG CTTCCGCATC
TTCACCGACT ACGTGGAGCG CATCGAGGTC CTGAAGGGGC CGTCCGCCGC CCTGACGGGG
GTGTCGCCGA ACGGCGCGGT CGGCGGCGTG GTCAACATCG TCCCCAAGCG CGCCGGGGCG
GACCTGACGC GCGTCACCCT GGATTACGGC TCGTCCGCCT GGGGCGGCAG CCAAGTCGAC
GTCGCCCGCC GCTGGGGTCC GGGCCGGGAA TGGGGCGCCC GCGTCGTCGG CAGCCTGCAC
GGCGGCGCCA CGCCCTTCGA CCGCCAGACC GAGACGACCG GCGTCGGGGC CCTGGCCCTC
GACTACCAAG GCGACCGGTT CCGCGCGTGG CTCTACCTGC TGGCGCAGAC CGACCGCTTC
GACGCGCCGC TGCGCCCGTT CCTCCTGCGG GCCGGCGTGC CCGTGCCGCG GGCGCCCGAC
GGCCGCCTGA ACCTGACCCA GCCCTGGGAG TACTCGGACG TCGACGATCG CGGCGGCCTG
CTGCGCACCG AGTACGACCT GACCGACCAG GTCACGCTGT TCGCGGATGT CGGCGGCGGG
CAGACCGGGG TCGAGCGCTA CTTCCAGTCG GCGCCGACGA TCCTCAACGG CCGCGGCGAC
ACGACCAGCA CGCCGCAATT CTACGCGCTG GGCGTCGACA GGCTGACCTA CGACGGCGGC
GTCCGGGCCC GGTTCGAGAC CGGCTTCATC CGTCACGCCC TGACGGTGCA GGGCTCCGTG
TACGACGAGG CCACGGCACG GCGGTTCTCG CCCGGCCGGG GCGCCTACCT GTCGAACCTC
TACGCGCCGG CCCTCGTCCC GTACATCGCG CCGATCTACG GCGTCGGCCG GCCCCGCCTG
TCCGACAGCA CCCTGTCGGG GATCGCGGTG GCCGACACGC TGTCGGCCCT CGACGAGCGC
GTCCTGCTGA CCCTGGGCGT GCGCCGCCAG CGCGTTGAGG CGCACAATTA CGTGTCGAAT
GTCGGCACGC TCGCCTCGTC CTACGACAGG AGCGCCACGA CCCCGATGGT CGGCCTCGTG
GTGCGGCCCT GGGACTCGGT CTCGCTCTAC GGCAACTACA TCGAGGGCCT GAGCCGCGGC
GACGTGGCCC CGGCGGTGGC GACCAATTCC GGCACGATCC TGGCGCCCTA CGTGGCCCGG
CAGGTCGAGG CGGGCGTCAA GCTCGATCTC GGCCGGTTCG GCGCCACGCT CGGCGCCTTC
CGGATCACGA AGCCCGCGGG CGAACTCGGC CCGCAGGGGC GCTTCGCGGC GACGGCCGAG
CAGCGCGTCG GCGGGCTCGA GCTGAGCCTG TTCGGCGAGA TCACCCCGCA GGTGCGGGTG
GTCGGCGGCG TCACCCTGCT GGACGGACGC CTCGTCCGGA CGGCGCTCGC CGCCAATCGC
GGGCACAGAC CGATCGGCGT GCCGGAGGTC CAGGCGAGCC TGGGCGCCGA GTGGGACCTG
CCCGGGTTAC CCGGCCTGAC GCTCAACGGC GCGGTCATCT ATACGGGGCG GCAGTTCGTC
GACCTCGCGA ATACCCAGGC GCTGCCCGAC TGGGCCCGCC TCGACCTCGG CCTGCGCTAC
ACGACCCTGG TCGCAGAGCG CCGGACGACC TTCCGGGCCA GCGTCCTCAA CGTGACCGAC
GCGCGCTACT GGACCGGCGT CGCCTCGTTC GGCACCTTCT TCCAGGGCGC GCCGCGCACC
TACCTGCTGT CGATGGCGGT GGACCTCTGA
|
|---|
| Protein sequence | MAVLLGFVGS GPHAARAEEA GAGRDVQLGE LSVEGAAAPR GPMPAYAGGQ VARGGRLGLL
GDTETQKAPF SIASYTDTLI RDRQARTLSE TLVLDPSVRA TQTTGAPFDS FSIRGFPANE
NTSGEVAFDG LYGIAPSFRI FTDYVERIEV LKGPSAALTG VSPNGAVGGV VNIVPKRAGA
DLTRVTLDYG SSAWGGSQVD VARRWGPGRE WGARVVGSLH GGATPFDRQT ETTGVGALAL
DYQGDRFRAW LYLLAQTDRF DAPLRPFLLR AGVPVPRAPD GRLNLTQPWE YSDVDDRGGL
LRTEYDLTDQ VTLFADVGGG QTGVERYFQS APTILNGRGD TTSTPQFYAL GVDRLTYDGG
VRARFETGFI RHALTVQGSV YDEATARRFS PGRGAYLSNL YAPALVPYIA PIYGVGRPRL
SDSTLSGIAV ADTLSALDER VLLTLGVRRQ RVEAHNYVSN VGTLASSYDR SATTPMVGLV
VRPWDSVSLY GNYIEGLSRG DVAPAVATNS GTILAPYVAR QVEAGVKLDL GRFGATLGAF
RITKPAGELG PQGRFAATAE QRVGGLELSL FGEITPQVRV VGGVTLLDGR LVRTALAANR
GHRPIGVPEV QASLGAEWDL PGLPGLTLNG AVIYTGRQFV DLANTQALPD WARLDLGLRY
TTLVAERRTT FRASVLNVTD ARYWTGVASF GTFFQGAPRT YLLSMAVDL
|
|---|
| |