| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4388 |
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| Symbol | |
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| ID | 6140447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 4655465 |
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| End bp | 4658794 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 641630095 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001757037 |
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| Protein GI | 170750777 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.20511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC GCAGGACGAA GGCGGGCGCC CAGCAGGGGC TGGAGGACGC GCCGCTGATG
CCCACCGGCG CCCTGGCGGT CGCGCTCCTG GCCTTCGCCG AGGGGCCGGG GCCGGTGGTG
CACGTCGCCC GGGACGCCCG CCGCCTCGAG GATCTCGCCG CGACCCTGCG GGCGCTGGAG
CCCGACGCGC GGGTCGCGGT CTATCCCGAG TGGGACTGCC TGCCCTTCGA CCACGCCTCG
CCGTCGCGGG CGACGATGGG CGCCCGGGCC GCCGTGATGC GCTGGCTGAC CGACCGGGAC
GCGCTGCCGG ACTTCGTTCT GACGACCGCC CCCGCCCTCG TGCAGCGCGT GCCGCCGCCG
GAGACCTGGG CCTCGGCCCG CGTGACGCTC CGGGTCGGCG ACCCCCTCGA CGTCGCGGCC
GCCACCGCCG ACCTCAAGCG CCTCGGCTAC ATCCTCGACG AGCGGGTCGA CGAGCCGGGC
GAGATCGCCG TCCGCGGGCG CACCGTGGAG GTGTTCCCCG CCGCCGCGCC GCGGCCGTGC
CGGATCGAGC ACGCGGAGGG CCGCGTCACC GCGATCCGCT CCTACGACCC GATCTCGCAG
CGCTCGGTGG CGGAGGCCGA CGAACTCGTC ATCGACCCGG CCACCGAGAT CATCCTGGAG
CCCGGTTCCG GCCAGAGCTT CGAGCCGTTC ACCGGGCAGG AGCACCGCCT GGACCGCTAC
TACCCGCGCC TCGTGACGCT CCTCGACTAC GTGCCCGAGG CGCGCCTCGC GGTCGAGGAC
GGCACCCAGG CCCGGATCGA CGCGTTCTTC GAGCAGATGG ACGAGGCGCG GGGCCGGATG
AAGGGCCGCG ACGCGCCGGC GGGGCCCGGC GCCGGCCTCT ACCTGGCGCC GGAGGCGTGG
CGCGCCATCG TGGCGGCCCA CGGCCGGCTC ACCGCCACCG AGGCGGCCGG GGAGCCGCGC
GCCATGCCGC GCTTCGCCGG GGAGCGCCGG CCCGGCACGG CCTTCGCCAA GGTCCTGCGC
GCGCGGCTGA AGGCCGGCGA CGTCGTCGTG CTCGCCGGCT CGGTCCGGCC GCTCCGGCGC
CTCGTGCGCC AGGCGGGCAA GATCGCCGAG CGCCCGATCC GGCTGATCGA CGCCTGGGCC
GACGTGGCCG AGGCGGCGCC CGGCGACGTC CTCGCCCTGG AGGCCCCGCT GGCGGCCGGC
TTCCGGGTGC CCGAGCAGGG CGCCAGCGTG ATCGCCGCCG CCGACCTGTT CGGTCCGGAA
GCCGCCGTCA CGGGCGGCGC CCGGGCGATC CTGCCGATGG GCGAGGTCGA CCTGCGCCCC
GGCGACGTGG CGGTCGACCG GGACCACGGC CTTTGCGTGT TCGAGGGGCT GGAGCCCGTC
TCGGCGCCGA GTGCCGCGCC GAGTGCCGCG CCGGGGGCAA CGCAGGACGG GGCGCCCTCC
GAGGCCCTGC GCCTGCGCTT CGCCGGCGAC GCGATCCTGA TGGTGCCGGT CACGCAGGCC
GATCGGATCT GGCGCTACGG GTCGGAGCCC GACGCCGTCA CCCTCGACAA GCTCGACGGC
GGCACGTGGC CCCGGCGCCG CCTGGAGGCC GAGGCCACCA TGGCGCGGAC CGCCCGCCTG
ATGCTGGAGG CCGCCCGGGC CCGCCGGGAG ACCGAGGCGC CGGTCCTGGC GCCGCCGGCC
AGCGAGATGG AGCGGTTCGC CGCCGGCTTC GGCTTCGCCC CGACCCCCGA CCAGGCGGCG
GCGGTCGACG CGCTGATGGC CGACCTCGCC TCCGGCCGCC CGATGGACCG GCTGGTCTGC
GGCGATGTCG GCTTCGGCAA GACCGAGGTG GCGCTGCGGG CGCTCGCGGC CGCGATCTTC
TCCGGCAGGC AGGCGGCGCT GATCGCGCCG ACCACCGTGC TGGCGCGCCA GCACGCCGAG
ACCCTGCGCC GCCGCTTCGG CCGGTTCGGC GTGGAGGTGG CGCAGCTCTC GCGCCTCGTG
GCCCCGGCCG AGGCCAAGCG CGTCAAGGCG GGGCTCGCCG ACGGCACGAT CCGGCTGGTG
GTCGGCACCC ACGCCCTCGC CGGCGGCGGG GTGGCGTTCG CCGATCTCGG CCTGACCGTG
ATCGACGAGG AGCAGCGCTT CGGCGCCAAG ATGAAGGCCG ACCTGCGCCG CCTCGCGGAC
GGCGGCCATG TGCTGACGCT CACCGCGACG CCGATCCCCC GCACCCTCCA GGCGGCGCTC
GTCGGCCTCC AGAGCCTCAG CGTGCTCGCC ACGCCGCCGG CTCTGCGCCA GCCGGTCCGG
ACCGTGGTGG CGCCCTTCGA CGCCGAGGCG GTCCGCGAGG CGCTCATCCG CGAGCACCGG
CGCGGCGGCC AGAGCTTCGT GGTCTGCCCG CGGATCGAGG ACATCGCCCC CATGGCCGAG
CGCCTGCGGG CCCTCGTGCC GGGCCTCGAC ATCCTGGTGG CGCACGGGGA TCTCAAGCCC
TCCGCCATGG ACGAGGTCAT GGTCCGGTTC GCGGAGGGCG ACGGCGACGT CCTGCTCGCC
ACCGCCATCG TGGAGAGCGG CCTCGACGTG CCGCGGGCCA ACACCATGCT GGTCTGGGAG
GCCGCCCGGT TCGGGCTGGC GCAGCTCCAC CAGCTCCGGG GCCGCGTCGG CCGCGGCCAG
CGCCGCGGCA CCGTCCACCT GCTCAGCGAC CCGGCCGCGC CCCCGCCGGC GGCGGCGCTC
CAGCGCCTGC GCGCCCTGGA GGCCCTCGAC CGCCTCGGGG CCGGCTTCGC GGTCAGCGCC
CGCGACCTCG ACCTGCGCGG CGCCGGCGAC CTCGTCGGCG AGGATCAGGC GGGGCACGCC
AAGCTCGTGG GGCTCGGCCT CTACCAGCAC CTCCTGCAGC TGGCGCTCAC CGCCGCCAAG
GGCGAGCGCG CCGAGGATTG GAGCCCGGAG ATCGAGCTCG GCCTGCCGAG CCGGATCCCC
GAGGACTACG TCCCCGAGCC CGAGATCCGC CTCAGCCTCT ACACGCGCCT CCTGCGCCTG
CAGGATGCCG AGGCGATCGA GGCGCTCGCC GGCGAAGTCG AGGACCGGTT CGGCGCGGCC
CCCGCGCCGG TGCTCGCCCT GTTCGACCTC GCGCGGCTGC GCGCGGCCTG CTGCGCGCTG
GGCGTCGCCC GGCTCCGGGG CGGCCCGCAG GGCGTCGCGG CCGACCTGCG CCCCGACCGG
CCGCTGACCG CGATGGCCGC CGAGGCGGGG ATCGTGCTGC GCGATGGGCG GGTGGTGTGG
AAGCGGCCCT GCCCGGATTC GGCCGCCTGC ACGGCGCTCG CGACCGACCT CCTGGAGCGC
ATCCGCGCCG TCCGGGAGAG TGCGGCCTGA
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| Protein sequence | MAKRRTKAGA QQGLEDAPLM PTGALAVALL AFAEGPGPVV HVARDARRLE DLAATLRALE
PDARVAVYPE WDCLPFDHAS PSRATMGARA AVMRWLTDRD ALPDFVLTTA PALVQRVPPP
ETWASARVTL RVGDPLDVAA ATADLKRLGY ILDERVDEPG EIAVRGRTVE VFPAAAPRPC
RIEHAEGRVT AIRSYDPISQ RSVAEADELV IDPATEIILE PGSGQSFEPF TGQEHRLDRY
YPRLVTLLDY VPEARLAVED GTQARIDAFF EQMDEARGRM KGRDAPAGPG AGLYLAPEAW
RAIVAAHGRL TATEAAGEPR AMPRFAGERR PGTAFAKVLR ARLKAGDVVV LAGSVRPLRR
LVRQAGKIAE RPIRLIDAWA DVAEAAPGDV LALEAPLAAG FRVPEQGASV IAAADLFGPE
AAVTGGARAI LPMGEVDLRP GDVAVDRDHG LCVFEGLEPV SAPSAAPSAA PGATQDGAPS
EALRLRFAGD AILMVPVTQA DRIWRYGSEP DAVTLDKLDG GTWPRRRLEA EATMARTARL
MLEAARARRE TEAPVLAPPA SEMERFAAGF GFAPTPDQAA AVDALMADLA SGRPMDRLVC
GDVGFGKTEV ALRALAAAIF SGRQAALIAP TTVLARQHAE TLRRRFGRFG VEVAQLSRLV
APAEAKRVKA GLADGTIRLV VGTHALAGGG VAFADLGLTV IDEEQRFGAK MKADLRRLAD
GGHVLTLTAT PIPRTLQAAL VGLQSLSVLA TPPALRQPVR TVVAPFDAEA VREALIREHR
RGGQSFVVCP RIEDIAPMAE RLRALVPGLD ILVAHGDLKP SAMDEVMVRF AEGDGDVLLA
TAIVESGLDV PRANTMLVWE AARFGLAQLH QLRGRVGRGQ RRGTVHLLSD PAAPPPAAAL
QRLRALEALD RLGAGFAVSA RDLDLRGAGD LVGEDQAGHA KLVGLGLYQH LLQLALTAAK
GERAEDWSPE IELGLPSRIP EDYVPEPEIR LSLYTRLLRL QDAEAIEALA GEVEDRFGAA
PAPVLALFDL ARLRAACCAL GVARLRGGPQ GVAADLRPDR PLTAMAAEAG IVLRDGRVVW
KRPCPDSAAC TALATDLLER IRAVRESAA
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