Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4343 |
Symbol | |
ID | 6140402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 4600097 |
End bp | 4602829 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641630050 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_001756992 |
Protein GI | 170750732 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATCGTA TCCCAGCGCG GACCCGGAAG CCGGAGGGCG CCCCGCGCCC GTCCCGCACC CTCGCCCTGC TCGCCGCGCT GGTGTTCGCA ACCCCGGCGG CCCTGGCCCT GCCGGCCTTC GCGCAGGATC CGGCGCCCGC CGCCAAGTCC GCCGATCAGA AACCCGCGGA TCACAAGCCT GCGGACACCA AGGCCGCCGA CACCAAGGCC GCGCCCGAGG CCAAGCCCGC GGACGGCAAG GCACCCGACG CGCAGGCGAC CGGCGCGAGA CCGGCCGACG CGAAGCCCGC GCCCCCGCCG GCCGCGAAGG CCGAGGTTCC CGAGCAGTTC AAGAAGGTCC GGGCCAAGCT CGACGCCGCC AAGGCCGAGC TCGACGCCCG CGAGAAGCAG CTCGGCCACG CGGAGCTGAC GGTCGTCGAC CTTAACGCCA TCCGCGACAG CGCCGTCACG GTCACCGACG AGATCCGCAC CCTGGTCACC CGGCTCGACG CGCCGCTGGA GGCCGCGCGC GAGCGCCTGG CCCAGCTCGG GCCGAAGCCG AAGGACACCC AGGAGAGCGC CGACGTCGCC GCGGAGCGCG CCGAGCGCGA GGCCGCCGTC ACCCGCATCG ACGAGACCCA GCGCCTCGCC CGCTCCCTGG TGGTGCAGGG CGACCAGATC GTCGACCGGG TCTCGAACCG CCGCCGCGAA TCCTTCACCC GCGACCTGCT CCAGCGCTCC CAGCCGCTGG TCGGCCCCGG TCTCTGGACC AAGGTGATGG GCGACGTGCC CCGGGACACG CGCGCCCTGC AGAGCGCCGT GTCGGATATC GGGCTGCTGT TCTCCCGCAA CGGCAGCCTC GCCAACCTGC TGTTCCTGGG CCTCGCCTTC GGGATCTCGG TGGCGCTGTA TTTCGGCCGG CGCAACATCG CCCCCAAGGG CGCCCGCCGG GACGCCACCA AGACCGATCC GTCGCGGCGC GCCGTGATGC TCGCCGCCTG GCGGGTGATC CTGCTCGGCA CGGTGCCGGC CGTGGCCGGG TCCTACGCGG TCTACTACGC CCTCGATTCC ACCAACCTGC TGCCGTCCCG GCTCCTGCCG GTCGCCGCCG CGATCCTCGG CGGCCTCGCC TTCATCGCCT TCGTGGAGGC CCTCTGCGAC GGGCTGCTCA GCCCCGAGAA GCCGGCCTGG CGGCCCGCCC CGGTGAGCGA CGCGGCGGCC ACGCGCCTGA CCCGGCTCGC CGTCGGCATC GCCACGGTGA TCACCGTGGT GAAGTCCGTC GAGGCGCTGA ACTCTGGGAT CTCGGCGGCC CTGCCGATCT CCATCGCCAC GCGGGGCATC GGCGCGGTCG CCACCGCGCT GATCCTCGCG GTCGGCCTCC ACCGCTTCGC CGACACCGAG CAGGAGGAGG AGGCCTGCTT CGGCCCCTAC GTGCCGACCA AGACCACGAC GGGCATCGGC GGGCCGGCCC GGCTCCTGGG CTGGGCCGCG GTGGCGCTGA TCGGGCTCGG CGCGCTGGTC GGCTACGTGG CCTTCGCGGC CTTCCTGATC GACCAGCTGA TCTGGGACGC GGCCGTCCTC GTGCTGCTCT ACCTGCTGGT CCAGAGCGTC GACATCTTCG TCGGCCGCGC GCTCAGCGAC GAGACGCGGC TCGCCACCAC GCTCCAGGCC AATACCGGCC TGCGCAAGCG CTCGCTCAAC CAGATCTCGG TCCTGACGAC GGGCGCGACC CGGCTCGTCC TGTTCCTGGC GGCCGCGGTC CTCGTGCTGG CGCCCTGGGG GCTCGATTCC ACCGACATCG TCTCGTCGGT CCGGCAGGCC TTCTTCGGCT TCAAGGTCGG CGACGTCACG ATCTCGCTCT CCAGCATCGC CTTCGGGATC GGCATCCTGG TGGTCGGCGT GTTCATCACC CGCGGGGTGC AGCGCTGGCT CGAGAACACC TACCTGCCGG CCACCGACCT CGACGCCGGC CTGCGCAACT CGATCACCAC GGTGGCGGGC TATTGCGGCT TCCTGATCGC GCTGGCGCTC GCCTTCTCGT ATCTCGGCCT GAGCCTGGAG AAGCTCACCA TCGTGGCCGG CGCCCTGTCG GTCGGTATCG GTTTCGGCCT CCAGTCGATC GTCAACAACT TCGTCTCCGG CCTGCTGCTC CTGTGGGAGC GCCCGATCCG GGTCGGCGAC CAGGTGGTGA TCGGCGATTC CGAGGGTATC GTGAAGCGGA TCTCGGTCCG CTCGACCGAG ATCCAGACCT TCGACCGCTC GGCCGTGATC GTGCCGAACT CGAACCTGAT CTCCGGCGTG GTCAAGAACC GGGTGCGGGG AGACCGGACC GGGCGCGTCA GCATCACGGT CAGCGTCCTG CGCAACCAGG ATCCGGTGCG CGCCGCCGAG ATGATCACGG CCTGCGCGCA GGGCCATGCC GACGTCCTGA AGGACCCGCC GCCCCGGGTG GTGTTCAAGA AGATCGGCGA CCCGTTCCTG GAATTCGAGC TCCTCGTCTG GATCGTGGAC GTGAGCCTCG GCCAGAAGGT GGTGACCGAC CTGAACTTCT CGGTGTTCGC GACCCTGTCG GAGGCGGGCT TCATCCCGCC GCTCGGGCCC GGCTCCAGCA TCGTCACCGT GCAGGGCCTC GACACGATGC AGAGCGCCAT GGGCGAGATC GCCAGCCGCT TCATCCAGCC GGCCGCGCTC CCCGAGGGTG GCGAATCAGC CCGGCCCCCG CGCGACCGCG GTCTGCGCAG CGCCGGCGCC TGA
|
Protein sequence | MHRIPARTRK PEGAPRPSRT LALLAALVFA TPAALALPAF AQDPAPAAKS ADQKPADHKP ADTKAADTKA APEAKPADGK APDAQATGAR PADAKPAPPP AAKAEVPEQF KKVRAKLDAA KAELDAREKQ LGHAELTVVD LNAIRDSAVT VTDEIRTLVT RLDAPLEAAR ERLAQLGPKP KDTQESADVA AERAEREAAV TRIDETQRLA RSLVVQGDQI VDRVSNRRRE SFTRDLLQRS QPLVGPGLWT KVMGDVPRDT RALQSAVSDI GLLFSRNGSL ANLLFLGLAF GISVALYFGR RNIAPKGARR DATKTDPSRR AVMLAAWRVI LLGTVPAVAG SYAVYYALDS TNLLPSRLLP VAAAILGGLA FIAFVEALCD GLLSPEKPAW RPAPVSDAAA TRLTRLAVGI ATVITVVKSV EALNSGISAA LPISIATRGI GAVATALILA VGLHRFADTE QEEEACFGPY VPTKTTTGIG GPARLLGWAA VALIGLGALV GYVAFAAFLI DQLIWDAAVL VLLYLLVQSV DIFVGRALSD ETRLATTLQA NTGLRKRSLN QISVLTTGAT RLVLFLAAAV LVLAPWGLDS TDIVSSVRQA FFGFKVGDVT ISLSSIAFGI GILVVGVFIT RGVQRWLENT YLPATDLDAG LRNSITTVAG YCGFLIALAL AFSYLGLSLE KLTIVAGALS VGIGFGLQSI VNNFVSGLLL LWERPIRVGD QVVIGDSEGI VKRISVRSTE IQTFDRSAVI VPNSNLISGV VKNRVRGDRT GRVSITVSVL RNQDPVRAAE MITACAQGHA DVLKDPPPRV VFKKIGDPFL EFELLVWIVD VSLGQKVVTD LNFSVFATLS EAGFIPPLGP GSSIVTVQGL DTMQSAMGEI ASRFIQPAAL PEGGESARPP RDRGLRSAGA
|
| |