| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4339 |
|---|
| Symbol | |
|---|
| ID | 6140398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4596532 |
|---|
| End bp | 4597524 |
|---|
| Gene Length | 993 bp |
|---|
| Protein Length | 330 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641630046 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001756988 |
|---|
| Protein GI | 170750728 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0371465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCGCT CCAAGCTGAA CGCTTTGGTG CGTAGCCTGA CGCTCGCGGC GAGCGTCGGC
GCGCCCTGCC TCGCCGCGGC CGCGGATCTG ATGCTCCCGC CGCCCCCGCC GCCGCCGCCC
CCGCCGATCG AGGTCGGCGG CGGCTGGTAC CTGCGCGGCG ACGTGGGCGC CAGCATCTAC
ACCCGTCCGC GCTACAGCGA CGCCTACGAC TACACCGGCT ACGCCGAGTC TAACCGCGCC
TTCGGCAACG CGGTCGGCGG CGGCGGTTTC GCGGGCGTCG GCGTCGGCTA CCAGTTCACC
CCGTTCCTGC GCGGCGACAT CACCGGTGAG TACCGCTACT CCACCGGCCT GCGCGGCAGC
GAGTACTACA AGGGTCCGGA TTTCGATAAC GGGCTCGGGT CGTACGGCGT GAACAAGTCG
AGCGGCAACT TCGACTCCGC GGTGGTTCTG GCCAACGCGT ATTTCGACCT CGGCACGTGG
TACGGGATCA CGCCGTTCAT CGGCGGCGGC GTCGGCTACG CGTTCAACCA CGTCTCGAGC
TACTCGACCA ACCAGCAGTT CACCAGCCCG ACCTACGGCT ACGATTACGC GAACCCGATC
TACGGCTGCG GCTGCGGACA ACCCTCCTAC AACTACGCGC CGGTCTACGA CGCGAACGGC
AACGCGGTCT ACAACACCAA CAGCGGCAGC AAGTTCTACA AGGACAAGAC CAGCGGCAGC
CTCGCCTGGG CGCTCCACGC CGGTCTCGCC TACAACGTGA CCGACGCGCT GAAGATCGAG
CTGGCCTACC GCTACCTGAA CCTCGGCAAG GCCGAGACCG GCCCGGGCTT CGTCCCGTGC
TGCACCGGCA GCCTCCAGGC GATCAAGATC AAGGACATCG AGGCGCACGA CGTGAAGATC
GGCCTGCGCT ACTACCTCGG CGGCGTCGTG GCGGCCCCGC TGCCGCCGCT GATGCCGGAG
CCGGTCCCCG GCCCGCTGGT GCGCAAGTAC TGA
|
|---|
| Protein sequence | MARSKLNALV RSLTLAASVG APCLAAAADL MLPPPPPPPP PPIEVGGGWY LRGDVGASIY
TRPRYSDAYD YTGYAESNRA FGNAVGGGGF AGVGVGYQFT PFLRGDITGE YRYSTGLRGS
EYYKGPDFDN GLGSYGVNKS SGNFDSAVVL ANAYFDLGTW YGITPFIGGG VGYAFNHVSS
YSTNQQFTSP TYGYDYANPI YGCGCGQPSY NYAPVYDANG NAVYNTNSGS KFYKDKTSGS
LAWALHAGLA YNVTDALKIE LAYRYLNLGK AETGPGFVPC CTGSLQAIKI KDIEAHDVKI
GLRYYLGGVV AAPLPPLMPE PVPGPLVRKY
|
|---|
| |