Gene Mrad2831_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4288 
Symbolrho 
ID6140347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4538773 
End bp4540059 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content66% 
IMG OID641629996 
Producttranscription termination factor Rho 
Protein accessionYP_001756938 
Protein GI170750678 
COG category[K] Transcription 
COG ID[COG1158] Transcription termination factor 
TIGRFAM ID[TIGR00767] transcription termination factor Rho 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0673197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCCG CCCTCGAGGG CGTCCGCGAG GTCAAGCTCC AGGACCTCAA ATCGAAGACG 
CCGACCGACC TGACGGCCTT CGCCGAGGAG GTCGAGGTCG AGAACGCCTC GACCATGCGC
AAGCAGGAGC TGATGTTCGC CATCCTGAAG CAGCTCGCTG CCAAGGAGGT CGAGATCATC
GGGTCGGGCA CCGTCGAGGT GCTGCAGGAC GGCTTCGGCT TCCTGCGCTC CTCCGACTCG
AACTACCTGC CCGGCCCGGA CGACATCTAC ATCTCGCCGA CCCAGATCCG CCGCTTCGGC
CTGCGGACCG GCGACACCGT CGAGGGCCCG ATCCGCGGCC CCAAGGACGG CGAGCGCTAC
TTCGCGCTGC TCAAGGTCAA CACGATCAAC TTCGAGAACC CGGAGAAGAT CAAGCACAAG
GTCCACTTCG ACAACCTGAC GCCGCTCTTC CCGACGAAGC GGTTCAAGCT CGAGCTGGAC
AACCCGACCA AGAAGGACTT CTCGCCGCGG ATCATCGACA TCGTGGCGCC GATCGGCAAG
GGCCAGCGCG CCCTGATCGT GGCGCCGCCG CGCACGGGTA AGACCGTGCT GATGCAGAAC
ATCGCCCAGT CGATCACCCT CAACCACCCG GAGTGCTACC TGATCGTGCT GCTCATCGAC
GAGCGGCCCG AGGAGGTCAC CGACATGCAG CGCTCGGTGA AGGGCGAGGT CATCGCCTCG
ACCTTCGACG AGCCGGCCAC CCGCCACGTG CAGGTCGCCG AGATGGTGAT CGAGAAGGCC
AAGCGCCTCG TGGAGCACGG GCGCGACGTG GTGATCCTCT TGGACTCCAT CACCCGCCTC
GGCCGCGCCT ACAACACCGT GGTGCCGTCC TCCGGCAAGG TGCTGACCGG CGGTGTCGAC
GCCAACGCCC TGCAGCGGCC CAAGCGCTTC TTCGGCGCGG CCCGCAACAT CGAGGAGGGC
GGCTCGCTCT CGATCATCGC CACGGCGCTG ATCGACACCG GCTCGCGCAT GGACGAGGTG
ATCTTCGAGG AGTTCAAGGG CACCGGCAAC TCCGAGATCA TCCTGGACCG CAAGGTCTCC
GACAAGCGCA TCTTCCCGGC GATCGACATC ACCCGCTCGG GCACCCGCAA GGAGGAGCTG
CTGGTCCCGC CGGACTCGCT CAAGAAGACC TACGTGCTGC GCCGCATCCT CAACCCGATG
GGCGTCACCG ACGCGATCGA GTTCCTGCTC GACAAGCTGC GCCAGACCAA GAGCAACAGC
GACTTCTTCG ACTCGATGAA CACCTGA
 
Protein sequence
MPAALEGVRE VKLQDLKSKT PTDLTAFAEE VEVENASTMR KQELMFAILK QLAAKEVEII 
GSGTVEVLQD GFGFLRSSDS NYLPGPDDIY ISPTQIRRFG LRTGDTVEGP IRGPKDGERY
FALLKVNTIN FENPEKIKHK VHFDNLTPLF PTKRFKLELD NPTKKDFSPR IIDIVAPIGK
GQRALIVAPP RTGKTVLMQN IAQSITLNHP ECYLIVLLID ERPEEVTDMQ RSVKGEVIAS
TFDEPATRHV QVAEMVIEKA KRLVEHGRDV VILLDSITRL GRAYNTVVPS SGKVLTGGVD
ANALQRPKRF FGAARNIEEG GSLSIIATAL IDTGSRMDEV IFEEFKGTGN SEIILDRKVS
DKRIFPAIDI TRSGTRKEEL LVPPDSLKKT YVLRRILNPM GVTDAIEFLL DKLRQTKSNS
DFFDSMNT