Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4288 |
Symbol | rho |
ID | 6140347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 4538773 |
End bp | 4540059 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641629996 |
Product | transcription termination factor Rho |
Protein accession | YP_001756938 |
Protein GI | 170750678 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0673197 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCG CCCTCGAGGG CGTCCGCGAG GTCAAGCTCC AGGACCTCAA ATCGAAGACG CCGACCGACC TGACGGCCTT CGCCGAGGAG GTCGAGGTCG AGAACGCCTC GACCATGCGC AAGCAGGAGC TGATGTTCGC CATCCTGAAG CAGCTCGCTG CCAAGGAGGT CGAGATCATC GGGTCGGGCA CCGTCGAGGT GCTGCAGGAC GGCTTCGGCT TCCTGCGCTC CTCCGACTCG AACTACCTGC CCGGCCCGGA CGACATCTAC ATCTCGCCGA CCCAGATCCG CCGCTTCGGC CTGCGGACCG GCGACACCGT CGAGGGCCCG ATCCGCGGCC CCAAGGACGG CGAGCGCTAC TTCGCGCTGC TCAAGGTCAA CACGATCAAC TTCGAGAACC CGGAGAAGAT CAAGCACAAG GTCCACTTCG ACAACCTGAC GCCGCTCTTC CCGACGAAGC GGTTCAAGCT CGAGCTGGAC AACCCGACCA AGAAGGACTT CTCGCCGCGG ATCATCGACA TCGTGGCGCC GATCGGCAAG GGCCAGCGCG CCCTGATCGT GGCGCCGCCG CGCACGGGTA AGACCGTGCT GATGCAGAAC ATCGCCCAGT CGATCACCCT CAACCACCCG GAGTGCTACC TGATCGTGCT GCTCATCGAC GAGCGGCCCG AGGAGGTCAC CGACATGCAG CGCTCGGTGA AGGGCGAGGT CATCGCCTCG ACCTTCGACG AGCCGGCCAC CCGCCACGTG CAGGTCGCCG AGATGGTGAT CGAGAAGGCC AAGCGCCTCG TGGAGCACGG GCGCGACGTG GTGATCCTCT TGGACTCCAT CACCCGCCTC GGCCGCGCCT ACAACACCGT GGTGCCGTCC TCCGGCAAGG TGCTGACCGG CGGTGTCGAC GCCAACGCCC TGCAGCGGCC CAAGCGCTTC TTCGGCGCGG CCCGCAACAT CGAGGAGGGC GGCTCGCTCT CGATCATCGC CACGGCGCTG ATCGACACCG GCTCGCGCAT GGACGAGGTG ATCTTCGAGG AGTTCAAGGG CACCGGCAAC TCCGAGATCA TCCTGGACCG CAAGGTCTCC GACAAGCGCA TCTTCCCGGC GATCGACATC ACCCGCTCGG GCACCCGCAA GGAGGAGCTG CTGGTCCCGC CGGACTCGCT CAAGAAGACC TACGTGCTGC GCCGCATCCT CAACCCGATG GGCGTCACCG ACGCGATCGA GTTCCTGCTC GACAAGCTGC GCCAGACCAA GAGCAACAGC GACTTCTTCG ACTCGATGAA CACCTGA
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Protein sequence | MPAALEGVRE VKLQDLKSKT PTDLTAFAEE VEVENASTMR KQELMFAILK QLAAKEVEII GSGTVEVLQD GFGFLRSSDS NYLPGPDDIY ISPTQIRRFG LRTGDTVEGP IRGPKDGERY FALLKVNTIN FENPEKIKHK VHFDNLTPLF PTKRFKLELD NPTKKDFSPR IIDIVAPIGK GQRALIVAPP RTGKTVLMQN IAQSITLNHP ECYLIVLLID ERPEEVTDMQ RSVKGEVIAS TFDEPATRHV QVAEMVIEKA KRLVEHGRDV VILLDSITRL GRAYNTVVPS SGKVLTGGVD ANALQRPKRF FGAARNIEEG GSLSIIATAL IDTGSRMDEV IFEEFKGTGN SEIILDRKVS DKRIFPAIDI TRSGTRKEEL LVPPDSLKKT YVLRRILNPM GVTDAIEFLL DKLRQTKSNS DFFDSMNT
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