Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4259 |
Symbol | |
ID | 6140318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 4504335 |
End bp | 4506794 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641629967 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001756909 |
Protein GI | 170750649 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.784351 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.958202 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCGCG CGTTCGCTTG CCTGACCGAG GAACATACCG GTTGGGTGGT CGCCCTGGCC GCCTGCGTGT GCTGGATCTC CTGCGCGGTC GCCCTCAAGC TCGAGCAGCG CGTCCAGGTC CGCGCCGACG GGTACGGGCC GGTCTGGCTC CTGGCGTCGG GCTTCTCGAT CGGGGCCGGG ATCTGGAGCA CGCACTTCAT CGGCATGCTG GGCTACGATC CCGGCGTGGT GCTGGGCTAC GAGCCGCGCA CGACCCTGCT CTCGCTGATC GTCGCGATCG CGGCCGCCAC CGTGGCGTTC CTGTTCGCCC GGGCCATGCC GTCGCGCTGG GCCGGGGCGG GGGCCGGGCT CGCGCTCGGG ATCGGCATCG CCTGCATGCA CTTCCTCGGC ATCGCCGGCG TGCGGCTGCC GGGGCACTTC ACCTGGGACC CGGCCCTGGC CGCCACGGCG ATCGCGGCGG GCTGCGGGCT CGCGGCCGCC GGCATGGCCA TCCATGTCGG GCGCGCGGGC GCGCGGGCGC GGCTCGCGGC CGCGACCGTC CTGACCCTCG CCATCGCGGT CCTGCACTTC CTGGCCATGG CGGCCGCCCG CGTGGTGCCG GACCCGGCCC TGGCGGTCCC GCAGCTCGGC CTCGCCCGCG GCGTCCTGGC CGCCGGCATC GCCGGCATGA TGGCGGTGAT CCTGGCCTTC GCGGCGCTGA CGCTGATGCT GGACCATCTG CGCCGGATCA ACGTCGCCCT GGCCCGGCAG GGCCGCATGC TGCGCGAGAA GACCCTGCTG CTCGACGCCA CCCTCGACAG CATGGACCAG GGCCTCATCA TGGTCGACGC GGGCGGCGTG GTCCGGGTGT GCAACGAGCG GGCGCTGGCG CTCCTCGACC TGCCCCGGGC GATGATGCAG GCGCGGCCGA GCTACCGGGC GGTGCTGCGC CACGAGGCGA GCCGCCGCGA GCGCCGGCGC CCGGACCGCT CGATCCGGAC CTGGATCGAG CGCGGCGAGG CCGGGCAGAC GCAGGTTCAC GAGCGGGCGC GGCCGAACGG CCTCGTGCTG GAGGTCCGCA CCGTGCCCCT GGCGGATGGC GGCTTCGTGC GGACCTTCAC CGACATCACC AAGCGGAAGG CCGCGGAGGC GGAGGTGGCG CGCCTCGCCC GCCACGACGT GCTCACCGGC CTGCCGAACC GGGCGCTGTT CCACGAGACC CTCGAACGCA GCCTCGCCGA CATCGTCCAG CGCGGCGGCG CCTGCGCGGT CCTGTACCTC GACCTCGACG GCTTCAAGAG CGTGAACGAC AGCCTCGGCC ACCAGGCCGG GGACGAGCTC CTCCGGCGCG TGGCGGCCGG CCTGCGGGGA ATCGCCGGGG ACGGGGCCGT GGCCCGGCTC GGGGGCGACG AGTTCGCCGT GCTCTCCGAC GGCGGCGCGG CCGAGGCCGG CGCCCTGGCC GAGCGCCTCA TCGCGCTGTT CGACAGCCCG TTCAGCGTGG GCGGGCACCG CGTCGGCGTC GGCCTGAGCG TCGGCATCGC GCTGGCGCCC GAGCACGGGA CCGACGCCGA GCCCCTGTAC CGCCGCGCCG ACCTCGCCCT CTACCGGGCC AAGGCCGAGG GCCGCGGCAC GTACCGGATC TTCACCCCCG CCATGGACGA GGAGGCCGAG GAGCGGCGGG TGCTCGAGCG CGACCTGCGC CAGGCCCTCG ACGACAACAC CCTGGGCCTG CACTACCAGC CGCAGGTCGA CGGCCACACG GGGGCGCTCG TCGGGTTCGA GGCGCTGCTG CGCTGGACCC ACCCGGTGCG CGGCAGCGTC TCGCCGAACC TGTTCGTGCC CCTCGCCGAG GAGACCGGCC TGATCGTGGC GCTCGGCGAC TGGGTGCTGC GCGAGGCCTG CCGCGAGGCG GCGCAGTGGG CGCAGCCCCT GAAGGTCGCC GTCAACCTCT CGCCCCGCCA GTTCCAGAAG CCGGACCTGC CCGAGACCGT CCTGGCGATC CTGGCGGAGA CCGGCCTGTC GCCGGACCGC CTGGAGCTGG AGGTCACCGA GAGCATCATC ATCAACGACA TGGCGCGGGC CGTGGGCATC CTCCGCCGCC TGAAGAGCTA CGGCATCCGG ATCAGCATGG ACGATTTCGG GACCGGCTAC GCGTCGCTCG CGACCCTCCA GGCCTTCCCG TTCGACAAGC TCAAGATCGA CCGCTCCTTC GTGGCGCAGC TCGGGACCGG GCCGCAGGCC GCCGTGATCG TGCGGGCCGT GCTCAGCCTC GGCCGCAGCC TCGGCATGGG CGTCGTCGCG GAGGGCGTCG AGACCCACGC GCAGATGAAG TTCCTGACCG AGGAGGCCTG CGGCGAGATG CAGGGCTACC TGTTCGGCAG GCCGCGCCCG ATCACCGATT ACGCCGCCGC GGTCGGCGGT CCCGCCGGGA CCTCCGGGGC CACCGCCCCG GCCGAGCCGG CCTTCGCGGC CGCCGGCTGA
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Protein sequence | MYRAFACLTE EHTGWVVALA ACVCWISCAV ALKLEQRVQV RADGYGPVWL LASGFSIGAG IWSTHFIGML GYDPGVVLGY EPRTTLLSLI VAIAAATVAF LFARAMPSRW AGAGAGLALG IGIACMHFLG IAGVRLPGHF TWDPALAATA IAAGCGLAAA GMAIHVGRAG ARARLAAATV LTLAIAVLHF LAMAAARVVP DPALAVPQLG LARGVLAAGI AGMMAVILAF AALTLMLDHL RRINVALARQ GRMLREKTLL LDATLDSMDQ GLIMVDAGGV VRVCNERALA LLDLPRAMMQ ARPSYRAVLR HEASRRERRR PDRSIRTWIE RGEAGQTQVH ERARPNGLVL EVRTVPLADG GFVRTFTDIT KRKAAEAEVA RLARHDVLTG LPNRALFHET LERSLADIVQ RGGACAVLYL DLDGFKSVND SLGHQAGDEL LRRVAAGLRG IAGDGAVARL GGDEFAVLSD GGAAEAGALA ERLIALFDSP FSVGGHRVGV GLSVGIALAP EHGTDAEPLY RRADLALYRA KAEGRGTYRI FTPAMDEEAE ERRVLERDLR QALDDNTLGL HYQPQVDGHT GALVGFEALL RWTHPVRGSV SPNLFVPLAE ETGLIVALGD WVLREACREA AQWAQPLKVA VNLSPRQFQK PDLPETVLAI LAETGLSPDR LELEVTESII INDMARAVGI LRRLKSYGIR ISMDDFGTGY ASLATLQAFP FDKLKIDRSF VAQLGTGPQA AVIVRAVLSL GRSLGMGVVA EGVETHAQMK FLTEEACGEM QGYLFGRPRP ITDYAAAVGG PAGTSGATAP AEPAFAAAG
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