Gene Mrad2831_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4259 
Symbol 
ID6140318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4504335 
End bp4506794 
Gene Length2460 bp 
Protein Length819 aa 
Translation table11 
GC content74% 
IMG OID641629967 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001756909 
Protein GI170750649 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.784351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.958202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGCG CGTTCGCTTG CCTGACCGAG GAACATACCG GTTGGGTGGT CGCCCTGGCC 
GCCTGCGTGT GCTGGATCTC CTGCGCGGTC GCCCTCAAGC TCGAGCAGCG CGTCCAGGTC
CGCGCCGACG GGTACGGGCC GGTCTGGCTC CTGGCGTCGG GCTTCTCGAT CGGGGCCGGG
ATCTGGAGCA CGCACTTCAT CGGCATGCTG GGCTACGATC CCGGCGTGGT GCTGGGCTAC
GAGCCGCGCA CGACCCTGCT CTCGCTGATC GTCGCGATCG CGGCCGCCAC CGTGGCGTTC
CTGTTCGCCC GGGCCATGCC GTCGCGCTGG GCCGGGGCGG GGGCCGGGCT CGCGCTCGGG
ATCGGCATCG CCTGCATGCA CTTCCTCGGC ATCGCCGGCG TGCGGCTGCC GGGGCACTTC
ACCTGGGACC CGGCCCTGGC CGCCACGGCG ATCGCGGCGG GCTGCGGGCT CGCGGCCGCC
GGCATGGCCA TCCATGTCGG GCGCGCGGGC GCGCGGGCGC GGCTCGCGGC CGCGACCGTC
CTGACCCTCG CCATCGCGGT CCTGCACTTC CTGGCCATGG CGGCCGCCCG CGTGGTGCCG
GACCCGGCCC TGGCGGTCCC GCAGCTCGGC CTCGCCCGCG GCGTCCTGGC CGCCGGCATC
GCCGGCATGA TGGCGGTGAT CCTGGCCTTC GCGGCGCTGA CGCTGATGCT GGACCATCTG
CGCCGGATCA ACGTCGCCCT GGCCCGGCAG GGCCGCATGC TGCGCGAGAA GACCCTGCTG
CTCGACGCCA CCCTCGACAG CATGGACCAG GGCCTCATCA TGGTCGACGC GGGCGGCGTG
GTCCGGGTGT GCAACGAGCG GGCGCTGGCG CTCCTCGACC TGCCCCGGGC GATGATGCAG
GCGCGGCCGA GCTACCGGGC GGTGCTGCGC CACGAGGCGA GCCGCCGCGA GCGCCGGCGC
CCGGACCGCT CGATCCGGAC CTGGATCGAG CGCGGCGAGG CCGGGCAGAC GCAGGTTCAC
GAGCGGGCGC GGCCGAACGG CCTCGTGCTG GAGGTCCGCA CCGTGCCCCT GGCGGATGGC
GGCTTCGTGC GGACCTTCAC CGACATCACC AAGCGGAAGG CCGCGGAGGC GGAGGTGGCG
CGCCTCGCCC GCCACGACGT GCTCACCGGC CTGCCGAACC GGGCGCTGTT CCACGAGACC
CTCGAACGCA GCCTCGCCGA CATCGTCCAG CGCGGCGGCG CCTGCGCGGT CCTGTACCTC
GACCTCGACG GCTTCAAGAG CGTGAACGAC AGCCTCGGCC ACCAGGCCGG GGACGAGCTC
CTCCGGCGCG TGGCGGCCGG CCTGCGGGGA ATCGCCGGGG ACGGGGCCGT GGCCCGGCTC
GGGGGCGACG AGTTCGCCGT GCTCTCCGAC GGCGGCGCGG CCGAGGCCGG CGCCCTGGCC
GAGCGCCTCA TCGCGCTGTT CGACAGCCCG TTCAGCGTGG GCGGGCACCG CGTCGGCGTC
GGCCTGAGCG TCGGCATCGC GCTGGCGCCC GAGCACGGGA CCGACGCCGA GCCCCTGTAC
CGCCGCGCCG ACCTCGCCCT CTACCGGGCC AAGGCCGAGG GCCGCGGCAC GTACCGGATC
TTCACCCCCG CCATGGACGA GGAGGCCGAG GAGCGGCGGG TGCTCGAGCG CGACCTGCGC
CAGGCCCTCG ACGACAACAC CCTGGGCCTG CACTACCAGC CGCAGGTCGA CGGCCACACG
GGGGCGCTCG TCGGGTTCGA GGCGCTGCTG CGCTGGACCC ACCCGGTGCG CGGCAGCGTC
TCGCCGAACC TGTTCGTGCC CCTCGCCGAG GAGACCGGCC TGATCGTGGC GCTCGGCGAC
TGGGTGCTGC GCGAGGCCTG CCGCGAGGCG GCGCAGTGGG CGCAGCCCCT GAAGGTCGCC
GTCAACCTCT CGCCCCGCCA GTTCCAGAAG CCGGACCTGC CCGAGACCGT CCTGGCGATC
CTGGCGGAGA CCGGCCTGTC GCCGGACCGC CTGGAGCTGG AGGTCACCGA GAGCATCATC
ATCAACGACA TGGCGCGGGC CGTGGGCATC CTCCGCCGCC TGAAGAGCTA CGGCATCCGG
ATCAGCATGG ACGATTTCGG GACCGGCTAC GCGTCGCTCG CGACCCTCCA GGCCTTCCCG
TTCGACAAGC TCAAGATCGA CCGCTCCTTC GTGGCGCAGC TCGGGACCGG GCCGCAGGCC
GCCGTGATCG TGCGGGCCGT GCTCAGCCTC GGCCGCAGCC TCGGCATGGG CGTCGTCGCG
GAGGGCGTCG AGACCCACGC GCAGATGAAG TTCCTGACCG AGGAGGCCTG CGGCGAGATG
CAGGGCTACC TGTTCGGCAG GCCGCGCCCG ATCACCGATT ACGCCGCCGC GGTCGGCGGT
CCCGCCGGGA CCTCCGGGGC CACCGCCCCG GCCGAGCCGG CCTTCGCGGC CGCCGGCTGA
 
Protein sequence
MYRAFACLTE EHTGWVVALA ACVCWISCAV ALKLEQRVQV RADGYGPVWL LASGFSIGAG 
IWSTHFIGML GYDPGVVLGY EPRTTLLSLI VAIAAATVAF LFARAMPSRW AGAGAGLALG
IGIACMHFLG IAGVRLPGHF TWDPALAATA IAAGCGLAAA GMAIHVGRAG ARARLAAATV
LTLAIAVLHF LAMAAARVVP DPALAVPQLG LARGVLAAGI AGMMAVILAF AALTLMLDHL
RRINVALARQ GRMLREKTLL LDATLDSMDQ GLIMVDAGGV VRVCNERALA LLDLPRAMMQ
ARPSYRAVLR HEASRRERRR PDRSIRTWIE RGEAGQTQVH ERARPNGLVL EVRTVPLADG
GFVRTFTDIT KRKAAEAEVA RLARHDVLTG LPNRALFHET LERSLADIVQ RGGACAVLYL
DLDGFKSVND SLGHQAGDEL LRRVAAGLRG IAGDGAVARL GGDEFAVLSD GGAAEAGALA
ERLIALFDSP FSVGGHRVGV GLSVGIALAP EHGTDAEPLY RRADLALYRA KAEGRGTYRI
FTPAMDEEAE ERRVLERDLR QALDDNTLGL HYQPQVDGHT GALVGFEALL RWTHPVRGSV
SPNLFVPLAE ETGLIVALGD WVLREACREA AQWAQPLKVA VNLSPRQFQK PDLPETVLAI
LAETGLSPDR LELEVTESII INDMARAVGI LRRLKSYGIR ISMDDFGTGY ASLATLQAFP
FDKLKIDRSF VAQLGTGPQA AVIVRAVLSL GRSLGMGVVA EGVETHAQMK FLTEEACGEM
QGYLFGRPRP ITDYAAAVGG PAGTSGATAP AEPAFAAAG