Gene Mrad2831_4193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_4193 
Symbol 
ID6140252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4442214 
End bp4444325 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content72% 
IMG OID641629901 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001756843 
Protein GI170750583 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.950963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.519215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTG GGACGGTCGC GCTGCGGGAG AAGGCGAAGC TCCTCGACAC CGTTCTCGAC 
GCCATGGATC AGGGGCTGAT GATGATCGAC GCCGACGGCG TCGTTCAAGT CTGTAATGCC
CGCGCCCTGG CGCTGCTCGA CCTGCCGCTG GCCCTGATGC GGTCCCGCCC GACCTTCGAG
GCCGTCCGGC AATACCAGAT CGCGCAGGGG GAGTTCGGGA AGGCGAGCGA AGCCCTGCAG
CGCTGGGTCG CCGACAGCGG CCTGGAGCGC CGCGCCCACA CCTACGAGCG CGAGCGCCCC
AACGGGACCG TGCTGGAGAT CCGCACCGTG CCGCTGCCCG ACGGCGGGGC GGTGCGGACC
TTCACGGACA TCACCGCGCG CAAGCGGGCC GAGGAGACGC TGCAGGTCAG CGAGACGCGC
CTCGCCCTGG CGCAGGACGC GGGCAGCGAC GGGCTCTGGG ACTGCGATCT CACGACCGGG
GAGGCGTGGT CCTCCGACCG CTGGTGGGGG GTTCTGGGCT ACGAGCCCGG CGAACTGGCG
AGCCACGCGC GGACGTGGCG GGCGCTGCTC CACCCGGAGG ATGCGGGCGC GGCCGAGCGG
GCCCTGGTCG AGCACCTGAG CGGGCGGGCG CCGACCTACG CGTCCGAGCA TCGCATGCGC
CGCAAGGACG GCTCCTGGGC CTGGATGATG ACGCGCGGCA AGGTGGTGGC GCGCGCCGCC
GACGGCCGCG CGCTGCGCTT CATCGGCACC CAGATCGACA TCACCGCGCG CAAGGCCGCC
GAGGGGCAGG TCGCCCACAT GGCGCGCCAC GACGGCCTCA CCGACCTGCC CAACCGCGCC
CTGTTCTACG AGCGGCTGGA GATCCGGCTC GCCGACCTGC ACCTGAACGG CGGCGCCTGC
GCGGTGCTGT GCCTCGACCT CGACCGCTTC AAGACCGTCA ACGACAGCCT CGGCCACGCG
GCCGGGGACT TCCTGCTCCG GGCGGTGGCC CATCGGATCC GCGCGGTGCT GCGGGCCGAC
GACATGGTGG CGCGCCTCGG CGGCGACGAG TTCGCCGTGC TGGTGGCCGA TGCGGACGAC
CCCGCCCGCG CGGAGACCTT GGCGGCCCGC CTGATCGCGG CCGTCCAGGC GCCGATCCCC
TTCGGCAAGC GGCGGCTGAA GGTGGGCCTG AGCGTCGGCA TCGCCCAGGC GCCCAGCCAC
GGCTTCGACA GCGAGACGCT GTTCCGCCGC GCCGATCTCG CCCTCCACCG GGCGAAGACC
GAAGGCCGGA ACACCCACCG GGTGTTCGAG CCCGCGATGG ACGAGGCCGA GGCGGCCCGG
CGCGACCTGG AGCGCGACCT GCGCCAAGCG ATCGAGGGCG ACGAGCTCAT CCTGTACTAT
CAGCCGCAGG TGAGTACCGG CACCGGCCGG CTGCTCGGGT TCGAGGCGCT CGTGCGCTGG
GAGCATCCGA CCCGCGGCCT CGTGCCGCCG AATGCCTTCA TCCCCCTGGC GGAGGAGAGC
GGGCTGATCC TGCCGCTGGG CGAGTGGGTG CTCCGCGCCG CCTGCCGGGA GGCGGCCCGC
TGGGCGCACC CGCTGAAGGT CGCGGTGAAC CTGTCGCCGC GCCAGTTCCA GCAGGCGGAT
CTGCCCGAGC GCGTCCTGGC GATCCTGACC GAGACGGGCC TGGCGCCGAC GCGGCTCGAA
CTCGAGATCA CCGAGACCCT GATCATCAAC GACATGGCGC GGGCACTCGG CATCCTGCGC
CGTCTGAAGG CTTTCGGCGT GTCCATCGCG ATGGACGATT TCGGCACCGG CTACTCGTCG
CTCGCGACGC TGCAGGCCTT CCCCTTCGAC AAGATCAAGA TCGACCGGTC CTTCGTGGGC
CATGTCGAGG TCAGCCCGCA GGCGGCGGTG ATCGTGCGGG CGGTTCTGGG GCTCGGCCGC
AGCCTCGGGA TGAGTGTCGT GGCGGAGGGC GTCGAGACGG ACGCGCAGAT GCGCTTCCTG
GCCGCGGAAG CGTGCGACGA GGCCCAGGGC TACCTGATCA GCAAGCCGCA GCCGATCGAG
CGGTTCGCCG AGCAGATCGA CGCGCCCGAA ACCTTCGTGC CGCCCGGCCG CCCCGACGCG
GCCGTCGCCT GA
 
Protein sequence
MNSGTVALRE KAKLLDTVLD AMDQGLMMID ADGVVQVCNA RALALLDLPL ALMRSRPTFE 
AVRQYQIAQG EFGKASEALQ RWVADSGLER RAHTYERERP NGTVLEIRTV PLPDGGAVRT
FTDITARKRA EETLQVSETR LALAQDAGSD GLWDCDLTTG EAWSSDRWWG VLGYEPGELA
SHARTWRALL HPEDAGAAER ALVEHLSGRA PTYASEHRMR RKDGSWAWMM TRGKVVARAA
DGRALRFIGT QIDITARKAA EGQVAHMARH DGLTDLPNRA LFYERLEIRL ADLHLNGGAC
AVLCLDLDRF KTVNDSLGHA AGDFLLRAVA HRIRAVLRAD DMVARLGGDE FAVLVADADD
PARAETLAAR LIAAVQAPIP FGKRRLKVGL SVGIAQAPSH GFDSETLFRR ADLALHRAKT
EGRNTHRVFE PAMDEAEAAR RDLERDLRQA IEGDELILYY QPQVSTGTGR LLGFEALVRW
EHPTRGLVPP NAFIPLAEES GLILPLGEWV LRAACREAAR WAHPLKVAVN LSPRQFQQAD
LPERVLAILT ETGLAPTRLE LEITETLIIN DMARALGILR RLKAFGVSIA MDDFGTGYSS
LATLQAFPFD KIKIDRSFVG HVEVSPQAAV IVRAVLGLGR SLGMSVVAEG VETDAQMRFL
AAEACDEAQG YLISKPQPIE RFAEQIDAPE TFVPPGRPDA AVA