| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_4193 |
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| Symbol | |
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| ID | 6140252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 4442214 |
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| End bp | 4444325 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641629901 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001756843 |
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| Protein GI | 170750583 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.950963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.519215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTG GGACGGTCGC GCTGCGGGAG AAGGCGAAGC TCCTCGACAC CGTTCTCGAC
GCCATGGATC AGGGGCTGAT GATGATCGAC GCCGACGGCG TCGTTCAAGT CTGTAATGCC
CGCGCCCTGG CGCTGCTCGA CCTGCCGCTG GCCCTGATGC GGTCCCGCCC GACCTTCGAG
GCCGTCCGGC AATACCAGAT CGCGCAGGGG GAGTTCGGGA AGGCGAGCGA AGCCCTGCAG
CGCTGGGTCG CCGACAGCGG CCTGGAGCGC CGCGCCCACA CCTACGAGCG CGAGCGCCCC
AACGGGACCG TGCTGGAGAT CCGCACCGTG CCGCTGCCCG ACGGCGGGGC GGTGCGGACC
TTCACGGACA TCACCGCGCG CAAGCGGGCC GAGGAGACGC TGCAGGTCAG CGAGACGCGC
CTCGCCCTGG CGCAGGACGC GGGCAGCGAC GGGCTCTGGG ACTGCGATCT CACGACCGGG
GAGGCGTGGT CCTCCGACCG CTGGTGGGGG GTTCTGGGCT ACGAGCCCGG CGAACTGGCG
AGCCACGCGC GGACGTGGCG GGCGCTGCTC CACCCGGAGG ATGCGGGCGC GGCCGAGCGG
GCCCTGGTCG AGCACCTGAG CGGGCGGGCG CCGACCTACG CGTCCGAGCA TCGCATGCGC
CGCAAGGACG GCTCCTGGGC CTGGATGATG ACGCGCGGCA AGGTGGTGGC GCGCGCCGCC
GACGGCCGCG CGCTGCGCTT CATCGGCACC CAGATCGACA TCACCGCGCG CAAGGCCGCC
GAGGGGCAGG TCGCCCACAT GGCGCGCCAC GACGGCCTCA CCGACCTGCC CAACCGCGCC
CTGTTCTACG AGCGGCTGGA GATCCGGCTC GCCGACCTGC ACCTGAACGG CGGCGCCTGC
GCGGTGCTGT GCCTCGACCT CGACCGCTTC AAGACCGTCA ACGACAGCCT CGGCCACGCG
GCCGGGGACT TCCTGCTCCG GGCGGTGGCC CATCGGATCC GCGCGGTGCT GCGGGCCGAC
GACATGGTGG CGCGCCTCGG CGGCGACGAG TTCGCCGTGC TGGTGGCCGA TGCGGACGAC
CCCGCCCGCG CGGAGACCTT GGCGGCCCGC CTGATCGCGG CCGTCCAGGC GCCGATCCCC
TTCGGCAAGC GGCGGCTGAA GGTGGGCCTG AGCGTCGGCA TCGCCCAGGC GCCCAGCCAC
GGCTTCGACA GCGAGACGCT GTTCCGCCGC GCCGATCTCG CCCTCCACCG GGCGAAGACC
GAAGGCCGGA ACACCCACCG GGTGTTCGAG CCCGCGATGG ACGAGGCCGA GGCGGCCCGG
CGCGACCTGG AGCGCGACCT GCGCCAAGCG ATCGAGGGCG ACGAGCTCAT CCTGTACTAT
CAGCCGCAGG TGAGTACCGG CACCGGCCGG CTGCTCGGGT TCGAGGCGCT CGTGCGCTGG
GAGCATCCGA CCCGCGGCCT CGTGCCGCCG AATGCCTTCA TCCCCCTGGC GGAGGAGAGC
GGGCTGATCC TGCCGCTGGG CGAGTGGGTG CTCCGCGCCG CCTGCCGGGA GGCGGCCCGC
TGGGCGCACC CGCTGAAGGT CGCGGTGAAC CTGTCGCCGC GCCAGTTCCA GCAGGCGGAT
CTGCCCGAGC GCGTCCTGGC GATCCTGACC GAGACGGGCC TGGCGCCGAC GCGGCTCGAA
CTCGAGATCA CCGAGACCCT GATCATCAAC GACATGGCGC GGGCACTCGG CATCCTGCGC
CGTCTGAAGG CTTTCGGCGT GTCCATCGCG ATGGACGATT TCGGCACCGG CTACTCGTCG
CTCGCGACGC TGCAGGCCTT CCCCTTCGAC AAGATCAAGA TCGACCGGTC CTTCGTGGGC
CATGTCGAGG TCAGCCCGCA GGCGGCGGTG ATCGTGCGGG CGGTTCTGGG GCTCGGCCGC
AGCCTCGGGA TGAGTGTCGT GGCGGAGGGC GTCGAGACGG ACGCGCAGAT GCGCTTCCTG
GCCGCGGAAG CGTGCGACGA GGCCCAGGGC TACCTGATCA GCAAGCCGCA GCCGATCGAG
CGGTTCGCCG AGCAGATCGA CGCGCCCGAA ACCTTCGTGC CGCCCGGCCG CCCCGACGCG
GCCGTCGCCT GA
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| Protein sequence | MNSGTVALRE KAKLLDTVLD AMDQGLMMID ADGVVQVCNA RALALLDLPL ALMRSRPTFE
AVRQYQIAQG EFGKASEALQ RWVADSGLER RAHTYERERP NGTVLEIRTV PLPDGGAVRT
FTDITARKRA EETLQVSETR LALAQDAGSD GLWDCDLTTG EAWSSDRWWG VLGYEPGELA
SHARTWRALL HPEDAGAAER ALVEHLSGRA PTYASEHRMR RKDGSWAWMM TRGKVVARAA
DGRALRFIGT QIDITARKAA EGQVAHMARH DGLTDLPNRA LFYERLEIRL ADLHLNGGAC
AVLCLDLDRF KTVNDSLGHA AGDFLLRAVA HRIRAVLRAD DMVARLGGDE FAVLVADADD
PARAETLAAR LIAAVQAPIP FGKRRLKVGL SVGIAQAPSH GFDSETLFRR ADLALHRAKT
EGRNTHRVFE PAMDEAEAAR RDLERDLRQA IEGDELILYY QPQVSTGTGR LLGFEALVRW
EHPTRGLVPP NAFIPLAEES GLILPLGEWV LRAACREAAR WAHPLKVAVN LSPRQFQQAD
LPERVLAILT ETGLAPTRLE LEITETLIIN DMARALGILR RLKAFGVSIA MDDFGTGYSS
LATLQAFPFD KIKIDRSFVG HVEVSPQAAV IVRAVLGLGR SLGMSVVAEG VETDAQMRFL
AAEACDEAQG YLISKPQPIE RFAEQIDAPE TFVPPGRPDA AVA
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