Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_4081 |
Symbol | trmE |
ID | 6140139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 4333634 |
End bp | 4334959 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641629791 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001756734 |
Protein GI | 170750474 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0162579 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA CCGACACGCT CTTCGCCCCG GCCAGCGGCT TCGGCCGGGC CGCCGTCGCG GTCATCCGCA TCAGCGGCCC GGCCGCGGGC GGCGTGCTCG CCACCCTGGG CGGCCGCCTG CCGACCCCGC GGCGGCTGTC CCTGCGGAGC CTCAGGGATC CGCGGGACGG CACCGAGCTC GACCGGGCGC TGGTGGCGTG GTTTCCCGGG CCGGACACCT ACAGCGGCGA GGATATGGCG GAGCTGCACC TCCACGGCGG CGCGGCCGTG CGGATGCGCG TCCTCGCGAC CCTCGCCCGC CTTCCCGGAT GCCGGGCGGC CGAGCCCGGG GCGTTCACGC GGCGGGCGGT CCTCAACGGC CGGATGGATC TCGCCGAGGC GGAGGCCGTC GCCGACCTGA TCGACGCCGA GACCGAGGGC CAGCGCCGGC AGGCCCTGCG CCAGCTCGAC GGCGCGCTCA GCCGGCAGGT GGCCGCGTGG CGCGCGGAGG CGATCGACTG CCTCGCCGCC GCGGAGGCCG CGCTCGACTT CGCCGACGAG GGGGACGTGG ACGATGCCGG GCTCGACGCC GCGCTGTTCG ACCGCGCCGC GCGCCTGCGG GACGCGGTCG CCGCGACGCT GCGCGACGGC CACCGCGGCG AGCGCCTGCG CGAAGGATTC ACGGTGGTGC TGGCGGGGGC GCCCAACAGC GGGAAGTCGA CGCTGCTGAA CGCCCTGAGC CGGCGGGACG TCGCCATCGT GTCGGACAGC CCGGGGACGA CCCGGGACGC CATCGAGGTG CGGCTCGACC TCGGCGGCCT GCCGGTCCTC CTGGTCGACA CGGCCGGGCT CCGCGAGACC GCGGAGCCAA TCGAGGCGCA GGGCATCGTG CGGACCCGGG CGCGGATCGA CACGGCCGAT CTGGTGGTCG CCCTCGTGCC CCCCGGCGGT GCTGTCCCGG ATCTCGGGCC GGGATGCCGT CCGATCCTGA TCGTCCGCAC GAAGGCCGAT CTTTTTGCCG GCTCACAGCC CGCCGGCGAC TCGGCCGACG TGACGGTCTC GGCCCATACC GGCGCCGGCA TGGACGACCT GCTCGACGCG ATCCAGGCCG CGGCCGAGGA CGGTCTCGGC ACCGGCGACG CACTGATCAC CCGCGCCCGT CACAGGGCCG CGCTCGAGGC CTGCGTGGCC CATCTCGACC GCGTCTCCGG GAGCGCCGGC GGTCTGCCGG AGCTGGCCGC GGAGGACCTG CGGCTCGCGG TCCGGGCGCT GGGCGAGGTG GCCGGCCATG TCGGCGTCGA GGACGTCCTC GACCGGCTGT TCAGCGGCTT CTGCATCGGG AAGTAG
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Protein sequence | MNETDTLFAP ASGFGRAAVA VIRISGPAAG GVLATLGGRL PTPRRLSLRS LRDPRDGTEL DRALVAWFPG PDTYSGEDMA ELHLHGGAAV RMRVLATLAR LPGCRAAEPG AFTRRAVLNG RMDLAEAEAV ADLIDAETEG QRRQALRQLD GALSRQVAAW RAEAIDCLAA AEAALDFADE GDVDDAGLDA ALFDRAARLR DAVAATLRDG HRGERLREGF TVVLAGAPNS GKSTLLNALS RRDVAIVSDS PGTTRDAIEV RLDLGGLPVL LVDTAGLRET AEPIEAQGIV RTRARIDTAD LVVALVPPGG AVPDLGPGCR PILIVRTKAD LFAGSQPAGD SADVTVSAHT GAGMDDLLDA IQAAAEDGLG TGDALITRAR HRAALEACVA HLDRVSGSAG GLPELAAEDL RLAVRALGEV AGHVGVEDVL DRLFSGFCIG K
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