Gene Mrad2831_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3980 
Symbol 
ID6140035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4233416 
End bp4233910 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content76% 
IMG OID641629691 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001756637 
Protein GI170750377 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00103744 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTCGCCC ATACCCGCGC CGATTCGGCG CCCAAGCCCA CCGACCCGGC GCTCGCCGGC 
GCCCGGATCC TCGTGGTCGA GGCGCGCTAC TACGACGCGA TCGCCGACGA ACTCCTCGCC
GGCGCGCTGG CGGCGATCGA GGCCGCCGAC GCCCGGGCCA CCGTGGTGAC CGTGCCGGGA
GCCCTGGAGA TCCCCGCCGC CGCGGCGATC CTGCTCGACA CGGGGGCCTA CGACGCCGTG
GTGGCGCTGG GCTGCGTCAT CCGCGGCGAG ACCGGCCACT ACGACATCGT CGCCGGCGAG
AGCGCCCGGG CGCTCATGGA CCTGTCGGTG CAGCGCCGGG TGCCCCTGGG CAACGGCATC
CTCACGGTCG AGACCGAGGC GCAGGCCCTC GCCCGCGCCC GGGTCGCCGA GATGAACAAG
GGCGGCGGTG CCGCCGAGGC GGCGCTCGGC GTGCTCGCCC TGAAGCGTAT GGCCGACGGC
GCGCGCCCGC GATGA
 
Protein sequence
MVAHTRADSA PKPTDPALAG ARILVVEARY YDAIADELLA GALAAIEAAD ARATVVTVPG 
ALEIPAAAAI LLDTGAYDAV VALGCVIRGE TGHYDIVAGE SARALMDLSV QRRVPLGNGI
LTVETEAQAL ARARVAEMNK GGGAAEAALG VLALKRMADG ARPR