Gene Mrad2831_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3979 
Symbol 
ID6140034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4232811 
End bp4233404 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content73% 
IMG OID641629690 
ProductNusB antitermination factor 
Protein accessionYP_001756636 
Protein GI170750376 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000171022 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGGGA CCCCCGACAC CCATCCGGAG ACCGGCACCG AAACCGCCGG CGCTCCCGCC 
AAGATCAGCC CGCGCAGCGG CGCGCGCCTC GCCGTCGTGC AGGCGCTCTA CGAGATGGAC
ATCTCCGGCA AGGGCGTGCT CGACGCCCTC GCCGAGTTCG AGGCCTTCTG GATCGGCCAG
GAGGTCGACG GGATCGCCCA TCCCCCGGCC GAGACCGCCT TCTTCCGCGA CCTGCTGCGC
GGCACGGTCG AGGAGCAGCG CGCCATCGAC CCGAAGCTCG ACCAGGCGCT CGCCCAGGGC
TGGCCGCTGC GGCGCATCGA GATCGTGCTC CGGGCGATCC TGCGGGCGGG CGCCTACGAG
CTGATGTTCC GCCGCGACGT GCCGGCGGCC GCGGCGATCT CGGAATACGT CGACGTGGCC
CACAGCTTCT ACACGGCCGA CGAGCCGGGC CTCGTCAACG CCGTCCTCGA CCGGGTCGCC
CGCGAGGTCC GGCCGGGCGA GGTCGGGGCC CCGAAGGCCT CCGGCAAGCC GGGCTCGTCC
AAGCCGCTCC CCGGCAAAGC TGCGGCTGGG AAACCGTCGG CCGGGAAGGC CTGA
 
Protein sequence
MTGTPDTHPE TGTETAGAPA KISPRSGARL AVVQALYEMD ISGKGVLDAL AEFEAFWIGQ 
EVDGIAHPPA ETAFFRDLLR GTVEEQRAID PKLDQALAQG WPLRRIEIVL RAILRAGAYE
LMFRRDVPAA AAISEYVDVA HSFYTADEPG LVNAVLDRVA REVRPGEVGA PKASGKPGSS
KPLPGKAAAG KPSAGKA