| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3958 |
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| Symbol | |
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| ID | 6140013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 4210866 |
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| End bp | 4211975 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641629669 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001756615 |
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| Protein GI | 170750355 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.107554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG ACGCGAACTT CATGCGCCTC GCCCTGGCGC TGGGCCGCCG CGGGCTCGGC
ACCACCTGGC CGAACCCGTC GGTCGGCGCC GTCGTGGTCG AGCCCGGGAC CGGCCGGATC
CTCGGGACGG CGGCCACGGC GCAGGGCGGG CGCCCGCACG GGGAGCCCGT GGCGCTCGCC
GCCGCCGGAG AGGCCGCCCG CGGCGCGACC CTCTACGTCA CCCTGGAGCC CTGCTCCCAT
CACGGCCGCA CGCCACCCTG CACCGACGCG ATCCTGGCCG CCGGGATCGC CCGGGTGGTC
AGCGCCCTGG AGGATCCCGA CCCGCGGGTG GCGGGGCGCG GCCACGACCT CCTGCGGCGG
GGCGGCGTCG CGGTCGAGAC CGGCCTGATG CGGGACGAGG CGGCGCGCGA CCATGTCGGC
CACGTCACCC GGGTGACGCG CGGCCGCCCG GCCCTGCACC TCAAGCTCGC CCGCACCCGG
GACGGCTTCT GCGCCGCCGC GGGGCCGGAG CGCCTGCGGA TCACCGGGCC GGTGGCGGAC
GGGGCGGTCC ACCTCTGGCG GGCCCACGCC GACGCGATCC TGATCGGCAT CGGCACCGCC
CGGGCCGACG ACCCGTCGCT GACGGTGCGG CTACCGGGCC TAGGGGCGCG CTCGCCCCTG
CGGGTCGTGC TCGATACGCA CCTGCGGCTC TCCCCCGCGA GCGTGCTCGC CCGGACCGCC
CGCGACACGC CGACCCTGGT GCTCACGACC CGCTCGGCGC CGGCCCACGC GCGGCGGGCC
CTGGAGGCGC TCGGCGTCGC GGTCGCGACC GTGCCGGCGG ACCCGGCCGG CGGGATCGAT
CTGCCGGCGG CCCTGACGCA TCTCGGCGAG CGCGGCCTGA CCCGCCTGTG CAGCGAGGGC
GGCCCCCGCC TTGCGGAGGC GCTCGCGCGG GCCGATCTGA TCGATGCCTG CACGCTCGTC
ACCGGGCCGA TGGCGCTGGG ACCGGCGGGC GGGCTGCGGG CCCTGGGCCC GGCCCTGGCG
GAGGCCCTTT CGGGCGATCG GTTCCGCGAG GCCGAGCGGC TGCAGCTCGG GCCCGACGCG
GCCGTGACCT ACGAGCGCAA CAGGACGTAA
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| Protein sequence | MSGDANFMRL ALALGRRGLG TTWPNPSVGA VVVEPGTGRI LGTAATAQGG RPHGEPVALA
AAGEAARGAT LYVTLEPCSH HGRTPPCTDA ILAAGIARVV SALEDPDPRV AGRGHDLLRR
GGVAVETGLM RDEAARDHVG HVTRVTRGRP ALHLKLARTR DGFCAAAGPE RLRITGPVAD
GAVHLWRAHA DAILIGIGTA RADDPSLTVR LPGLGARSPL RVVLDTHLRL SPASVLARTA
RDTPTLVLTT RSAPAHARRA LEALGVAVAT VPADPAGGID LPAALTHLGE RGLTRLCSEG
GPRLAEALAR ADLIDACTLV TGPMALGPAG GLRALGPALA EALSGDRFRE AERLQLGPDA
AVTYERNRT
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