Gene Mrad2831_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3944 
Symbol 
ID6139999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp4196604 
End bp4197539 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content69% 
IMG OID641629655 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001756601 
Protein GI170750341 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1176] ABC-type spermidine/putrescine transport system, permease component I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCGCCCTGCC CGCCGCCGCG GCCGCCGAGC GGACCGCGGC GCCCGCCGTC 
GCGGCGCGCC CCCGCCGCCG CGCCCTCGCC TATCTCCAGG CCGCCCCGCT GGCCCTCGTC
TTCCTGATCT TCCTCGTGGT CCCGCTGGTG CTCACCGGGA TCGTCTCGCT CTGGGAGTAC
AACGAGTACG AGATCATCCC GGCGCTCACC CTTCAGAACT ACGCCGACGT GTTCGACGGC
TGCCTGTCGG CCGACCTCTG CACCACGGTG CGCACCTATC TCTCGACGGT GAAGTTCGTC
GTGCTGACGC TGGCGATCAC CCTGCCGCTC GGCTTCGCCG TCGCGTACTT CCTGGCCTTC
CACGTCCGCT CGGGCACGGT GCGGATGGGC CTGTTCCTGC TCTGCACGAT CCCGTTCTGG
ACCTCGAACG TGATCCGCAT GATCTCGTGG ATCCCGCTGC TCGGCCGCAA CGGCCTCGTC
AACGACACGC TGCGCAGCCT CGGGCTGATC CGCGCGCCGA TCGAGGGCCT GCTCTACTCC
GACTTCGCGG TGGTCCTGGC ATTCGTGCAC CTCGACACGG TGTTCATGAT CGTGCCGATC
TTCAACAGCC TCGCGCGCAT CGACCGGCGG CTGATCGAGG CGGCGCGCGA CGGCGGCGCG
TCCGGCGCGC AGATCCTCTG GAACGTGATC CTGCCGCTCG CCAAGCCCGG CATCGCCATC
GGGACGATCT TCGTGACGAC GCTGGTGATG GGCGACTTCG TCACCGTCGG CGTCATGGGC
GGCCAGCAGA TCGCCAGCGT CGGCAAGGTG ATCCAGGTGC AGATGTCCTA CCTGCAGTTT
CCGGCCGCCG CCGCCAACGC CGTGGTGCTG CTCGCCGCGG TGCTGCTGAT GATCCTGGGG
CTCACCCGGA TGATCGACCT CCGGCGGGAG CTGTAG
 
Protein sequence
MTDLALPAAA AAERTAAPAV AARPRRRALA YLQAAPLALV FLIFLVVPLV LTGIVSLWEY 
NEYEIIPALT LQNYADVFDG CLSADLCTTV RTYLSTVKFV VLTLAITLPL GFAVAYFLAF
HVRSGTVRMG LFLLCTIPFW TSNVIRMISW IPLLGRNGLV NDTLRSLGLI RAPIEGLLYS
DFAVVLAFVH LDTVFMIVPI FNSLARIDRR LIEAARDGGA SGAQILWNVI LPLAKPGIAI
GTIFVTTLVM GDFVTVGVMG GQQIASVGKV IQVQMSYLQF PAAAANAVVL LAAVLLMILG
LTRMIDLRRE L