| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3839 |
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| Symbol | rpoB |
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| ID | 6139893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 4087374 |
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| End bp | 4091498 |
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| Gene Length | 4125 bp |
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| Protein Length | 1374 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641629550 |
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| Product | DNA-directed RNA polymerase subunit beta |
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| Protein accession | YP_001756497 |
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| Protein GI | 170750237 |
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| COG category | [K] Transcription |
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| COG ID | [COG0085] DNA-directed RNA polymerase, beta subunit/140 kD subunit |
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| TIGRFAM ID | [TIGR02013] DNA-directed RNA polymerase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.353736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACA CGCTGGTCGG TCGCAAGCGC ATTCGGAAGT TCTTCGGCAA GATCAAGGAA
GTTGCCGAGA TGCCGAACCT CATCGAGGTT CAGAAGGCGT CCTACGACCA GTTCCTGATG
GTCGACGAGC CCGAGGGCGG GCGCGCCGAC GAGGGGCTGC AGAGCGTGTT CAAGTCGGTG
TTCCCGATCT CCGACTTCGC CTCCACGGCG CTGCTGGAGT TCGTGCGCTA CACCTTCGAG
GCGCCCAAGT ACGACGTGGA CGAGTGCCGC CAGCGCGGCA TCACCTTCGC GGCGCCGCTG
AAGGTCACGC TGCGCCTCAT CGTGTTCGAT GTCGATCCCG ACACCCAGGC CAAGTCGGTC
AAGGACATCA AGGAGCAGGA CGTCTACATG GGCGACATGC CCCTGATGAC GGAGAACGGC
ACCTTCATCG TCAACGGCAC CGAGCGCGTC ATCGTCTCGC AGATGCACCG CTCGCCGGGC
GTGTTCTTCG ACCACGACAA GGGCAAGACC CACTCCTCGG GCAAGCTCCT GTTCGCCGCC
CGCATCATCC CGTACCGGGG CTCCTGGCTC GACGTCGAGT TCGACGCCAA GGACATCGTG
CACGTCCGCA TCGACCGGAA GCGCAAGCTG CCGGCGACGT CGCTGCTCTA CGCGCTCGGC
CTCGACGGCG AGGAGATCCT GTCGACCTTC TACAACAAGG TCGTCTACGA CCGGGACGGC
GCCGACTGGC GCGTGCCGTT CGACGCCGAG CGCATGAAGG GCATGAAGGC CACCGTCGAC
CTGATCGACG CCGATTCCGG CGAGGTCGTG CTCGAGGCCG GCAAGAAGCT CAACGCCCGC
AACGCCCGCC AGATCACCGA GAAGGGCACC AAGTTCCTCA AGGCGACCGA CGAGGATCTC
GTCGGCCAGT ACGTCGCCGA GGACCTCGTC AACGCCCAGA CCGGTGAGAT CTGGGCCGAG
GCCGGCGAGG AGGTCACCGA CAAGCTCCTG AAGAGCCTGG AGGAGGTCGG GATCACCGAG
CTGCCGGTGC TCGACATCGA CCACGTCAAC ATCGGCCCGT ACATCCGCAA CACGCTGGCG
GTGGACAAGA ATTCCAACCG CGAGGGCGCG CTGTTCGACA TCTACCGGGT CATGCGCCCG
GGCGAGCCGC CGACCCTCGA GACCGCCGAG GCGATGTTCC ACTCGCTGTT CTTCGATTCC
GAGCGCTACG ACCTCTCGGC GGTCGGCCGC GTGAAGATGA ACATGCGTCT CGACCTCGAC
GCCGCCGACA CCGTGCGCAC GCTCCGCAAG GAGGACATGC TGGCGGTGGT CAAGGCGCTC
GTGGAGCTGC GCGACGGCAA GGGCGAGGTC GACGACATCG ACCACCTCGG CAACCGCCGC
GTCCGCTCGG TGGGCGAGCT CATGGAGAAC CAGTACCGCC TGGGCCTCCT GCGCATGGAG
CGCGCCATCC GCGAGCGCAT GAGCCAGGTC GACATCGACA CGGTCATGCC GCAGGACCTG
ATCAACGCGA AGCCCGCGGC CGCGGCCGTG CGCGAGTTCT TCGGCTCGTC GCAGCTGTCG
CAGTTCATGG ACCAGACCAA CCCGCTCTCC GAGGTGACGC ACAAGCGCCG CCTCTCGGCC
CTCGGCCCGG GCGGTCTGAC CCGCGAGCGC GCCGGCTTCG AGGTGCGCGA CGTGCACCCG
ACGCACTACG GCCGCATCTG CCCGATCGAG ACGCCGGAAG GCCCGAACAT CGGCCTGATC
AACTCGCTCG CGACCTTCGC GCGGGTGAAC AAGTACGGCT TCATCGAGAC CCCGTTCCGC
CGCGTGCGCG ACGGCGTGGT CACCGACGAG GTCGCCTACC TCTCGGCCAT GGAGGAGGCG
AAGTACTACG TCGCCCAGGC GAACGCCCAG ATGGACGAGA ACCGCAAGCT CACGGAGGAC
CTCGTGGTCT GCCGCCGGGC CGGCGAGGTG ATCGTCGTGG GTCCCGAGCG CGTCGACCTC
ATGGACGTGT CGCCGAAGCA GCTCGTCTCG GTGGCCGCGG CGCTGATCCC GTTCCTCGAG
AACGACGACG CCAACCGCGC GCTCATGGGC TCGAACATGC AGCGCCAGGC GGTGCCGCTG
GTCCGCGCCG ACGCCCCGTT CGTGGGCACC GGCATGGAGG CGGTGGTCGC CCGGGATTCC
GGCGCCGCCA TCGCGGCCCG CCGGGCCGGC ATCATCGATC AGGTGGACGC CACCCGTATC
GTCATCCGCG CCACCGAGGA GGCCGACGCC AACAAGCCCG GCGTCGACAT CTACCGCCTG
CAGAAGTTCC AGCGCTCCAA CCAGTCGACC TGCATCACGC AGAAGCCGCT GGTCCGCGTC
GGCGAGTTCG TGAAGAAGGG CGAGATCATC GCCGACGGTC CCTCGACCGA GTTCGGCGAG
CTGGCGCTCG GCCGGAACGT GCTCGTCGCG TTCATGCCGT GGAACGGCTA CAACTTCGAG
GACTCGATCC TGCTCTCCGA GCGGATCGTG AAGGATGACG TGTTCACCTC GATCCACATC
GAGGAGTTCG AGGTGATGGC CCGCGACACC AAGCTCGGGC CGGAGGAGAT CACCCGCGAC
ATCCCGAACG TCTCCGAGGA GGCGCTCAAG AACCTCGACG AGGCCGGCAT CGTCTACATC
GGTGCCGAGG TGAATGCCGG CGACATCCTC GTCGGCAAGA TCACCCCGAA GGGCGAGAGC
CCGATGACGC CGGAGGAGAA GCTGCTCCGC GCCATCTTCG GCGAGAAGGC CTCGGACGTG
CGCGACACCT CGCTGCGGGT GCCGCCGGGC GTCACCGGCA CGATCGTCGA GGTCCGAGTG
TTCAACCGCC ACGGCGTCGA CAAGGACGAG CGCGCCCAGG CGATCGAGCG CGAGGAGATC
GAGCGGCTCG CCAAGGACCG CGACGACGAG CAGGCGATCC TCGACCGCAA CACCTACGCC
CGCCTGGCGG ACGTGCTGAT CGGTCAGGCG CCGGTGGCCG GCCCGAAGGG CTTCAAGAAG
GACACCACGC TCACCCGCGA GCTGATCAAC GACTACCCGC GCTCGCAGTG GTGGCAGTTC
GCCGTCATCG ACGACCGTCT CATGACCGAG ATGGAGGCGA TGCAGAAGCA GTACGACGAG
TCGAAGAAGC GCCTCGAGCA GCGCTTCCTC GACAAGGTCG AGAAGCTGCA GCGCGGCGAC
GAGCTGCCCC CCGGCGTCAT GAAGATGGTC AAGGTCTTCG TGGCGGTGAA GCGCAAGATC
CAGCCGGGCG ACAAGATGGC CGGCCGTCAC GGCAACAAGG GTGTCGTGTC GCGGATCGTG
CCGATCGAGG ACATGCCGTT CCTGGAAGAC GGGACGCACG CCGACATCGT GCTCAACCCG
CTGGGCGTGC CCTCGCGCAT GAACGTCGGG CAGATCCTGG AGACGCACCT GGGCTGGGCG
GCTGCGGGCC TGGGTCGCAA GGTGTCGAAG GCGGTGGATG CCTATCTGAA GACCCAGGAC
ATCGCGCCGC TGCGGGAGGA GATGAAGGCG ATCTACTCCC CCGGCGAGCT CGACGGCCTG
ACGGACGAGG AGCTGGCCGA GGCCGGCAAC AACGTCCGCC GCGGCGTGCC GATGGCCACC
CCGGTCTTCA ACGGCGCCAA GGAGGCCGAC ATCGAGCAGA TGCTGGAGAT GGCCGGGCTG
GACCGCTCGG CGCAGTCGAC GCTCTACGAC GGGCGCACCG GCGAGCCCTT CGACCGCAAG
GTCACCATGG GCTACATCTA CATGCTGAAG CTCCACCACC TCGTGGACGA CAAGATCCAC
GCGCGCTCGA TCGGCCCGTA CTCGCTCGTC ACCCAGCAGC CGCTGGGCGG CAAGGCGCAG
TTCGGCGGCC AGCGCTTCGG CGAGATGGAG GTCTGGGCGC TCGAGGCCTA CGGCGCGGCC
TACACGCTGC AGGAGATGCT CACGGTGAAG TCGGACGACG TGGCCGGCCG CACCAAGGTC
TACGAGGCGA TCGTCCGCGG CGACGACACG TTCGAGGCCG GCATCCCCGA GTCGTTCAAC
GTGCTCGTCA AGGAGATGCG CTCGCTCGGC CTCAACGTCG AGCTCACCTC CTCCAAGAAG
GCGGCCAACG ACCAGCTGGA GCCGCCGGCG GACGCGGCCG AGTAA
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| Protein sequence | MANTLVGRKR IRKFFGKIKE VAEMPNLIEV QKASYDQFLM VDEPEGGRAD EGLQSVFKSV
FPISDFASTA LLEFVRYTFE APKYDVDECR QRGITFAAPL KVTLRLIVFD VDPDTQAKSV
KDIKEQDVYM GDMPLMTENG TFIVNGTERV IVSQMHRSPG VFFDHDKGKT HSSGKLLFAA
RIIPYRGSWL DVEFDAKDIV HVRIDRKRKL PATSLLYALG LDGEEILSTF YNKVVYDRDG
ADWRVPFDAE RMKGMKATVD LIDADSGEVV LEAGKKLNAR NARQITEKGT KFLKATDEDL
VGQYVAEDLV NAQTGEIWAE AGEEVTDKLL KSLEEVGITE LPVLDIDHVN IGPYIRNTLA
VDKNSNREGA LFDIYRVMRP GEPPTLETAE AMFHSLFFDS ERYDLSAVGR VKMNMRLDLD
AADTVRTLRK EDMLAVVKAL VELRDGKGEV DDIDHLGNRR VRSVGELMEN QYRLGLLRME
RAIRERMSQV DIDTVMPQDL INAKPAAAAV REFFGSSQLS QFMDQTNPLS EVTHKRRLSA
LGPGGLTRER AGFEVRDVHP THYGRICPIE TPEGPNIGLI NSLATFARVN KYGFIETPFR
RVRDGVVTDE VAYLSAMEEA KYYVAQANAQ MDENRKLTED LVVCRRAGEV IVVGPERVDL
MDVSPKQLVS VAAALIPFLE NDDANRALMG SNMQRQAVPL VRADAPFVGT GMEAVVARDS
GAAIAARRAG IIDQVDATRI VIRATEEADA NKPGVDIYRL QKFQRSNQST CITQKPLVRV
GEFVKKGEII ADGPSTEFGE LALGRNVLVA FMPWNGYNFE DSILLSERIV KDDVFTSIHI
EEFEVMARDT KLGPEEITRD IPNVSEEALK NLDEAGIVYI GAEVNAGDIL VGKITPKGES
PMTPEEKLLR AIFGEKASDV RDTSLRVPPG VTGTIVEVRV FNRHGVDKDE RAQAIEREEI
ERLAKDRDDE QAILDRNTYA RLADVLIGQA PVAGPKGFKK DTTLTRELIN DYPRSQWWQF
AVIDDRLMTE MEAMQKQYDE SKKRLEQRFL DKVEKLQRGD ELPPGVMKMV KVFVAVKRKI
QPGDKMAGRH GNKGVVSRIV PIEDMPFLED GTHADIVLNP LGVPSRMNVG QILETHLGWA
AAGLGRKVSK AVDAYLKTQD IAPLREEMKA IYSPGELDGL TDEELAEAGN NVRRGVPMAT
PVFNGAKEAD IEQMLEMAGL DRSAQSTLYD GRTGEPFDRK VTMGYIYMLK LHHLVDDKIH
ARSIGPYSLV TQQPLGGKAQ FGGQRFGEME VWALEAYGAA YTLQEMLTVK SDDVAGRTKV
YEAIVRGDDT FEAGIPESFN VLVKEMRSLG LNVELTSSKK AANDQLEPPA DAAE
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