| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3796 |
|---|
| Symbol | |
|---|
| ID | 6139849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 4038143 |
|---|
| End bp | 4039120 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641629506 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_001756454 |
|---|
| Protein GI | 170750194 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.472243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.57339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACG CCATCGCCGA GAAGCTGTTC GATCCGCGCT TCATGGGCAC GGTCCTGGCC
GCCGTCGCGG CGGCCGCGAC CGCCTACGCG GTGGCGCAGC CCTTCCTGGA GACCGACCGG
CTCGGCAAGC GGATGAAGCT CGTCAGCGAC GAGCGAGAGC AGATCCGGCG GCGCGAGCGG
CTGAGCGCGG AGCGGACCGG CAACCGGGCG ACGCTGCGCA CGGAGCCGAA GGCCTACATG
AAGTCCATCG TCGAGCGGTA CCAGCTGCGC CGCTGGCTCG GCACGGACAC CGCCAAGCGC
AAGCTGATGC AGGCGGGCTA TCGCGGCCAG GGGGCGGAGA CGGCGTTCCT GTTCTTCCGC
CTCGTCGTGC CGGTGGTCGC GGTGATCGCG GCCCTGTTCT ACCTGTTCGT GCTGGAGGTG
CTCGACGCCT CGTACCTCAT GCGGTTCGGG CTGGTGATCG GCGCGGCCTA CATGGGCATC
AAGGCGCCGG AGCTGTTCCT GGTGAACACC GCCAAGAAGC GCCAGACCGA GATCCGCAAG
GCGTGGCCCG ACGCCCTCGA CCTCACGCTG ATCTGCGTGG AATCCGGCAT GGCGATCGAG
AACGCGTTCC GGAAGGTGAG CACCGAGATC GCCACGTCCT CGGTCGTGCT GGCCGAGGAA
CTCGCGCTGA TGACCGCCGA GATGTCGTTC CTGCCCGACC GGCGCCAGGC CTACGAGAAC
CTCGTGATGC GCACCGGGCT CGAGCCGGTG AAATCCGTGG CCACGGCGCT GATCCAGGCC
GAGCGCTACG GCACGCCGGT GGGTCAGGCG CTGCGCGTGC TGAGCCAGGA GAGCCGCGAC
ATGCGCATGA ACGAGGCCGA GAAGAAGGCG GCCGGGCTTC CGCCGAAGCT CACCGTCCCG
ATGATCCTGT TCTTCCTGCC CGTGCTGTTC GTGGTCATCA TCACCCCGGC GGTCATCCAG
ATCATGCGGA CGCAGTGA
|
|---|
| Protein sequence | MIDAIAEKLF DPRFMGTVLA AVAAAATAYA VAQPFLETDR LGKRMKLVSD EREQIRRRER
LSAERTGNRA TLRTEPKAYM KSIVERYQLR RWLGTDTAKR KLMQAGYRGQ GAETAFLFFR
LVVPVVAVIA ALFYLFVLEV LDASYLMRFG LVIGAAYMGI KAPELFLVNT AKKRQTEIRK
AWPDALDLTL ICVESGMAIE NAFRKVSTEI ATSSVVLAEE LALMTAEMSF LPDRRQAYEN
LVMRTGLEPV KSVATALIQA ERYGTPVGQA LRVLSQESRD MRMNEAEKKA AGLPPKLTVP
MILFFLPVLF VVIITPAVIQ IMRTQ
|
|---|
| |