| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3762 |
|---|
| Symbol | |
|---|
| ID | 6139815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 4002689 |
|---|
| End bp | 4004077 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641629472 |
|---|
| Product | deoxyribodipyrimidine photo-lyase |
|---|
| Protein accession | YP_001756420 |
|---|
| Protein GI | 170750160 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | [TIGR00591] photolyase PhrII |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.12101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.44256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCC AGGGTGAGCG GGTCCGGATC CTCAACGATG TCGAGCCGGG CGGAGACGGT
GCCTACGTCC TGTATCTCCT GCAGCAGGCC AATCGGGCGA CGTTCAACCC GGCCCTTGAA
CTCGCCATCG AGGAGGCGAA CCGCCTCGAT CTGCCGGTCG TCGCCTGCTT CGGCCTGCTC
GACGGCGCCA GCGGCTTTCC CGAAGCCAAT GCCCGCCACT ACGCCTTCCT GCTCCAGGGT
CTCGCGGATG CGAAGGCGGG CCTGGAGAAG CGCGGGGTCG GCTTCGTCAT GCGCAAGTGC
TCGCCCGCCG AGATCGCCAT CGCCCTCGCC GAGGACGCCG CGCTCCTCGT GCTCGACCGC
GGCTACCTCG CGATCCAGAA GGGCTGGTAC CGGGAGATCG CCGCGGCGGT GAAGACGCGG
ATCGTCCAGG TCGAGGGCGA CGTCGTCGTG CCGGTCGAGA CGGCCTCGCC GAAGCACGAG
TACGCCGCCC GGACGCTGCG GCCGAAGCTG AACCGGCTGT GGGACCCGTT CCTCGCGCCG
CTGAAGCCCC GCAGGGTGAA GCACTCCGCC GATCGGCTGA CGCTGAAGAG CGCGATCGAC
GTCTCCGATC CGGAGGCGGT ACTCGCCGGG ATGACCCTCG ACCGGGAGGT CGGCCCGGTG
AGGCGCTTCA CCGGCGGCGA GACGCAGGCC CGCAAGCGCC TGAAGGCGTT CCTGAAAGAC
GGGTTCTCGG GCTACGGCGC GGGGCGCAAC ATGCCGGAGG CGGCCGCCGC CTCGCACATG
AGCCCGTACC TGCATTTCGG GCAGATCTCG CCGGTGGAGA TCGCCCTGGC GGTGCGGGAA
GCCAAGGTCG GCGATTCCGA CGACCGCGGC GCCTACCTGG AGGAGCTGAT CGTCCGGCGC
GAGCTCGCCA TGAACCACGT CTACTACACG GAGGGCTACG ACGATTACGA CAGGGCGGTG
CCGGACTGGG CGCGCAAGAC CCTGGCGGAG CACGCGAGGG ACGAGCGCCC CCACGCCTAC
TCGGAAGCGC AGCTCGCCGC CGGCGAGACC CACGACCGCT ACTGGAACGC CGCGATGCGC
GAGATGCGCG AGACCGGCTA CATGCACAAC CAGCTGCGGA TGTACTGGGG CAAGAAGATC
CTCGAATGGT CCCCATCCCC CCGGGAGGGC TTCGCCCGGA CGCTCCGGCT GAACAACCGC
TACTTCCTCG ACGGGCGCGA TCCGAATTCC TTCACCAACG TCGCCTGGGT GTACGGTCTG
CACGACCGGC CCTGGCAGAA GCGCAAGATC TTCGGCACGG TCCGCTATCA GAGCGAGAAC
TCGCTCAAGA AGTTCGACGC CAAGGCGTAC GTGCGGGCGG TTGAGAGGCT CTGCGCCGCG
GAGGTCTGA
|
|---|
| Protein sequence | MAIQGERVRI LNDVEPGGDG AYVLYLLQQA NRATFNPALE LAIEEANRLD LPVVACFGLL
DGASGFPEAN ARHYAFLLQG LADAKAGLEK RGVGFVMRKC SPAEIAIALA EDAALLVLDR
GYLAIQKGWY REIAAAVKTR IVQVEGDVVV PVETASPKHE YAARTLRPKL NRLWDPFLAP
LKPRRVKHSA DRLTLKSAID VSDPEAVLAG MTLDREVGPV RRFTGGETQA RKRLKAFLKD
GFSGYGAGRN MPEAAAASHM SPYLHFGQIS PVEIALAVRE AKVGDSDDRG AYLEELIVRR
ELAMNHVYYT EGYDDYDRAV PDWARKTLAE HARDERPHAY SEAQLAAGET HDRYWNAAMR
EMRETGYMHN QLRMYWGKKI LEWSPSPREG FARTLRLNNR YFLDGRDPNS FTNVAWVYGL
HDRPWQKRKI FGTVRYQSEN SLKKFDAKAY VRAVERLCAA EV
|
|---|
| |