| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3580 |
|---|
| Symbol | |
|---|
| ID | 6139633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3802140 |
|---|
| End bp | 3804839 |
|---|
| Gene Length | 2700 bp |
|---|
| Protein Length | 899 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641629291 |
|---|
| Product | aconitate hydratase 1 |
|---|
| Protein accession | YP_001756239 |
|---|
| Protein GI | 170749979 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.068843 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.451076 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTCAC TCGACAGCTT CAAGGCCCGC CAGACGCTCG AAGCCGGCGG CAAGACCTAC
ACCTACTACT CCATTCCCGC GGCCGAGAAG AACGGCCTCG CCTCCGCCGC CGCGCTGCCC
TTCTCCATGA AGGTGATCCT GGAGAACCTG CTGCGCTACG AGGACGACCG CTCGGTCAAG
AAGGCCGACA TCGAGGCCGC CGTCGGCTGG CTCGACCAGA AGGGCAAGGC CGAGGTCGAG
ATCGCGTTCC GCCCCTCGCG GGTGCTGATG CAGGACTTCA CCGGTGTGCC GGCGGTGGTC
GACCTCGCCG CCATGCGCGA CGCCATGGTG GCGCTCGGCG GCGACCCGCA GAAGATCAAC
CCGCTGGTGC CGGTCGATCT CGTGATCGAC CACTCGGTGA TCGTCGACGA GTTCGGCACC
CCGAAGGCGC TGGCCGACAA CGTCGCCCTG GAATACGAGC GCAACGGCGA GCGCTACACC
TTCCTGAAGT GGGGCCAGTC GGCCTTTGAC AACTTCTCGG TGGTCCCCCC GGGCACCGGC
ATCTGCCACC AGGTGAACCT CGAATACCTC GCCCAGACCG TCTGGACGAA GTCGGAGAAC
GGCGCCGACG TCGCCTATCC CGACTCGCTC GTCGGCACCG ATTCGCACAC CACCATGGTC
AACGGCATGG CCGTGCTGGG CTGGGGCGTC GGCGGTATCG AGGCCGAGGC GGCCATGCTC
GGCCAGCCGC TGTCGATGCT GATCCCCGAG GTCGTGGGCT TCAAGCTGTC GGGCAAGCTG
CCCGAGGGCA CCACCGCCAC CGACCTCGTG CTCACCGTCA CCCAGATGCT GCGCAAGAAG
GGCGTGGTCG GCAAGTTCGT GGAGTTCTAC GGCCCCGGCC TCGACGACAT GGCCGTCGCC
GACCGGGCCA CGATCTCCAA CATGGCGCCC GAGTACGGCG CGACCTGCGG CTTCTTCCCG
GTCGACCAGA AGACCATCGA CTTCCTGAAG GTCACCGGCC GCTCCGACGA TCGGATCGCC
CTGGTCGAGG CCTACGCGAA GGCGCAGGGC ATGTGGCGCG ACGCCCAGAC CCCCGACCCG
GTCTTCACCG ACACGCTGGA GCTCGACATG GGCGAGGTCC GGCCCTCGCT CGCCGGCCCG
AAGCGCCCGC AGGACCGGGT GCTCCTCGAC GGCGCCAAGG CGGGCTTCGC CGCTTCCATG
GAGACCGAGT TCAAGAAGGC CGCCGACCTC GCCCGCCGCT ACCCGGTCGA GGGCACCAAC
TTCGACATCG GGCACGGCGA CGTGGTGATC GCCGCGATCA CGAGCTGCAC CAACACGTCG
AACCCCTCGG TGATGATCGG CGCGGGGCTG CTGGCCCGCA ACGCCGTCGC CAAGGGCCTG
CGCTCCAAGC CCTGGGTGAA GACCTCGCTC GCGCCCGGAT CGCAGGTGGT CGGCGAGTAC
CTGGAGAAGT CCGGCCTGCA GGAGCCGCTG GACGCGCTCG GCTTCAACCT CGTGGGCTTC
GGCTGCACGA CCTGCATCGG CAATTCCGGC CCGCTGCCGG AGGCGATCTC GAAGGCGATC
AACGACAACG ACGTCGTCGC CGCGGCGGTG CTCTCGGGCA ACCGCAACTT CGAGGGCCGC
GTGAACCCCG ACGTGCGGGC GAACTACCTC GCCTCGCCGC CGCTGGTCGT CGCCTACGCG
CTCGCCGGCT CGCTCCAGAT CGACATCACC ACCGAGCCGC TGGGCCAGGG ATCCGACGGC
AAGCCGGTCT ACCTGAGGGA CATCTGGCCG TCCTCGGCCG AGGTGCAGCA GTTCATCGAG
GAGAACATCA CCTCGGCGCT GTTCAAGTCC CGCTACGCCG ACGTGTTCGG CGGCGACCAG
AACTGGAAGG ACGTCGAGGT CACCGAGGCC GAGACCTTCG CGTGGAACCC GGGCTCCACC
TACGTGCAGA ACCCGCCCTA CTTCGTCGGC ATGGAGAAGA CCCCGAAGCC GGTCGAGGAC
ATCGAGGGCG CGCGCATCCT CGGCCTGTTC CTCGACTCGA TCACCACCGA CCACATCTCG
CCGGCGGGCA ACATCCGCGC GGCGTCGCCG GCCGGCGAGT ACCTGCAGTC GCATCAGGTG
CGCGTGCAGG ACTTCAACCA GTACGGCACG CGGCGCGGCA ACCACGAGGT GATGATGCGG
GGCACCTTCG CCAACATCCG CATCAAGAAC CAGATGGTGA AGGACGCCTC CGGCGGCGTG
GTCGAGGGCG GGTGGACGCA CTTCCAGCCG TCCGGCGAGA AGATGTTCAT CTACGACGCG
GCGATGAAGT ACGCCGAGCA GGGCACGCCG CTCGTCATCT TCGCCGGCAA GGAGTACGGC
ACCGGCTCGT CGCGCGACTG GGCGGCCAAG GGCACGAAGC TGCTCGGCGT CCGCGCCGTG
GTGGCCGAGA GCTTCGAGCG CATCCACCGC TCGAACCTCG TCGGGATGGG CGTGGTGCCG
CTGGTCTTCC AGGGCGACAC GAGCTGGCAG TCGCTGGGCC TGAAGGGTGA CGAGACCGTC
ACCATCAAGG GCCTCGCCGG GGAGCTGAAG CCCCGCCAGA CGCTGACCGC GGAGATCAAG
TCCGCCGACG GCTCGGTGAA GCAGGTTCCC CTGACCTGCC GCATCGATAC GCTCGACGAG
CTCGAGTACT TCCGCAACGG CGGCATCCTG CCCTACGTGC TCCGCTCGCT CGCGGCCTAG
|
|---|
| Protein sequence | MPSLDSFKAR QTLEAGGKTY TYYSIPAAEK NGLASAAALP FSMKVILENL LRYEDDRSVK
KADIEAAVGW LDQKGKAEVE IAFRPSRVLM QDFTGVPAVV DLAAMRDAMV ALGGDPQKIN
PLVPVDLVID HSVIVDEFGT PKALADNVAL EYERNGERYT FLKWGQSAFD NFSVVPPGTG
ICHQVNLEYL AQTVWTKSEN GADVAYPDSL VGTDSHTTMV NGMAVLGWGV GGIEAEAAML
GQPLSMLIPE VVGFKLSGKL PEGTTATDLV LTVTQMLRKK GVVGKFVEFY GPGLDDMAVA
DRATISNMAP EYGATCGFFP VDQKTIDFLK VTGRSDDRIA LVEAYAKAQG MWRDAQTPDP
VFTDTLELDM GEVRPSLAGP KRPQDRVLLD GAKAGFAASM ETEFKKAADL ARRYPVEGTN
FDIGHGDVVI AAITSCTNTS NPSVMIGAGL LARNAVAKGL RSKPWVKTSL APGSQVVGEY
LEKSGLQEPL DALGFNLVGF GCTTCIGNSG PLPEAISKAI NDNDVVAAAV LSGNRNFEGR
VNPDVRANYL ASPPLVVAYA LAGSLQIDIT TEPLGQGSDG KPVYLRDIWP SSAEVQQFIE
ENITSALFKS RYADVFGGDQ NWKDVEVTEA ETFAWNPGST YVQNPPYFVG MEKTPKPVED
IEGARILGLF LDSITTDHIS PAGNIRAASP AGEYLQSHQV RVQDFNQYGT RRGNHEVMMR
GTFANIRIKN QMVKDASGGV VEGGWTHFQP SGEKMFIYDA AMKYAEQGTP LVIFAGKEYG
TGSSRDWAAK GTKLLGVRAV VAESFERIHR SNLVGMGVVP LVFQGDTSWQ SLGLKGDETV
TIKGLAGELK PRQTLTAEIK SADGSVKQVP LTCRIDTLDE LEYFRNGGIL PYVLRSLAA
|
|---|
| |