| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3572 |
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| Symbol | |
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| ID | 6139625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 3793021 |
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| End bp | 3795342 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641629283 |
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| Product | ribonuclease R |
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| Protein accession | YP_001756231 |
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| Protein GI | 170749971 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.923698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCACGAC GCACCACCGC CCCGGCGGCC GAGCCCGCCG CTCCGCAGCC CTTCCCCACC
CGTGAGCAGA TCCTCGCCTT CGTGGCCGAG TCGAAGGAGC GCGTCGGCAA GCGGGAGATC
GCCAAGGCCT TCGGCATCAA GGGGGCCGCC AAGATCGACC TGAAGCGCGT CCTGAAGGAG
ATCGAAGAGG ACGGCGCCCT CGACCGCGGC CGCGGCGGCC TCGCCCCGGC GGGCCACCTA
CCGCCGGTCG TGCTGGCCGA CATCCGCTCC CGCGACCGCC ACGGCGACTT CCTGGCGATC
CCGGTGGAGT GGACCGGGAC CGGCAAGCCG CCCGCCATCG TTCTGGTGCA GCCGCGCGGC
CCCCGGAAGG GCAACCGTCC GGCCCCGGGC ATCGGCGACC GCGCCCTGAT CCGGGTCGAG
CGCGACGCGG AAGGCGGCTA CGCCGGCCGG GTCGTCAAGG TCATCGGGAA GAACAAGGCC
GAGATCATCG GCGTCTACCG GGCCGGCGCG CAGGGCGGCC GGATCGTGCC CGTCGAGAAG
CGCGCGCAGG GCCGCGAGAT CCTGATCCCG CCCGGCGAGG AGGGGCAGGC CCGCGACGGC
GACCTCGTCA GCGTCTCGCT GGAGCGCGAG ACGCGGTTCG GCCTGCCGAA GGGGCGTGTG
CGCGAGCGAT TGGGCTCGCT CGGTTCCGAG AAGGCGGTGA GCCTGATCGC GCTGCACCTC
CACAACATCC CGCACGTCTT CGCCGACGCG ACCCTGGCGG AGGCCGACGC CGCCAGGCCC
GCCACGCTGA AGGGCCGCGA GGACTGGCGC GACCGGCCCC TCCTGACCAT CGACCCGCCG
GACGCCAAGG ACCACGACGA TGCCGTCATG GCCGAGGCCG ATCCCGACCC GGCCAATCCC
GGCGGCTTCA TCCTCACCGT CGCCATCGCG GACGTGGCCG CCTATGTCCG GCCGGGCTCC
AGCCTCGACC GCGAGGCCCT GGAACGGGGC AACTCGGTCT ACTTCCCCGA CCGGGTCGTG
CCGATGCTGC CCGAGCGGAT CTCGAACGAC CTCTGCTCCC TCCGCGAGGG CGAGGACCGG
CCGGCGCTGG CGGTGCGGAT GGTCATCGCC GCCGACGGCG AGAAGCGCCG CCACGGCTTC
CACCGGGTGA TGATACGCTC CCGCGCGAAG CTCGCCTACG CGCAGGCGCA GGCCGCCATC
GACGGGCGCC CGGACGATGC GACCGGGCCG CTTCTGGAGA CGGCCCTTCG CCCCCTCTGG
GCGGCCTACG CGGCCCTGCG CGCGGCCCGC GACCGCCGGG GGCCGCTGGC CCTCGACCTG
CCCGAGCGCA AGGTCCTGCT CTCGCCCGAG GGCGCGGTCG ACCGGGTGAT CGTGCCGGAG
CGCCTCGACG CCCACCGGCT GATCGAGGAG TTCATGATCC AGGCGAACGT CGCCGCCGCC
GAGACGCTGG AGCAGGCCCG ACAGCCCCTG ATCTACCGCG TCCACGACGA GCCCGCCCTG
GAGAAGATGC GGGCGCTCGG CGAGGTCCTG GCCTCGGTGG GCATCAAGCT GCCCAAGGAA
GGGGCGCTGC GCCCCGCCCT GTTCAACCGG ATCCTCGCCA CGGCGGCCGA GACCGAGCAC
GGCGTCTTCC TCAACGAGGT GATCCTGCGC AGCCAGGCCC AGGCCGTCTA CGCCCCCGAG
AATCTCGGGC ATTTCGGCCT GAACCTGCGC CGCTACGCGC ACTTCACCTC GCCGATCCGG
CGCTACGCCG ACCTGATCGT GCACCGGGCG CTGATCACCG CCTGCCGGCT CGGATCGGAC
GGGCTCGCGA GCGACGTCTC CCTCGGCGAG CTGGCGCAGA TCGGCGAGCA GATCTCGGCG
GCCGAGCGCC GCGCCATGGC GGCCGAGCGC GAGACGATCG ACCGGCTCAT CGCCCACCAC
CTCGCCGACC AGGTCGGCGC GACCTTCGCG GGTCAGATCG CCGGCGTCAC CCGGGCCGGC
CTGTTCATCA AGCTCGACGA GACCGGCGCG GACGGCTTCG TGCCGGTCTC GCAGCTCGGC
GCCGACTATT TCCGCCACGA GGAGGGCCGC CACGCCCTGG TGGGCGAGCG CACCGGGGAG
ACGTTCCGCC TCGGCGACCG GGTCGAAGTG CGGCTCGTGG AGGCCGCACC GGTGGCCGGG
GCGTTGCGCT TCGAGCTGCT CAGCGAGGGC CGGACCCGCT CCGGTGGCCG GACTGCCGGG
CCCGGCAAGA AGGCCGGCGG CCGGGCCTTC AAGGCCGCGC CGCCCGGCCG CCCCCCCGGC
ATCCGCAACA CCGGGTCGCG CCACCGCGGC TCGCGCCACT GA
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| Protein sequence | MARRTTAPAA EPAAPQPFPT REQILAFVAE SKERVGKREI AKAFGIKGAA KIDLKRVLKE
IEEDGALDRG RGGLAPAGHL PPVVLADIRS RDRHGDFLAI PVEWTGTGKP PAIVLVQPRG
PRKGNRPAPG IGDRALIRVE RDAEGGYAGR VVKVIGKNKA EIIGVYRAGA QGGRIVPVEK
RAQGREILIP PGEEGQARDG DLVSVSLERE TRFGLPKGRV RERLGSLGSE KAVSLIALHL
HNIPHVFADA TLAEADAARP ATLKGREDWR DRPLLTIDPP DAKDHDDAVM AEADPDPANP
GGFILTVAIA DVAAYVRPGS SLDREALERG NSVYFPDRVV PMLPERISND LCSLREGEDR
PALAVRMVIA ADGEKRRHGF HRVMIRSRAK LAYAQAQAAI DGRPDDATGP LLETALRPLW
AAYAALRAAR DRRGPLALDL PERKVLLSPE GAVDRVIVPE RLDAHRLIEE FMIQANVAAA
ETLEQARQPL IYRVHDEPAL EKMRALGEVL ASVGIKLPKE GALRPALFNR ILATAAETEH
GVFLNEVILR SQAQAVYAPE NLGHFGLNLR RYAHFTSPIR RYADLIVHRA LITACRLGSD
GLASDVSLGE LAQIGEQISA AERRAMAAER ETIDRLIAHH LADQVGATFA GQIAGVTRAG
LFIKLDETGA DGFVPVSQLG ADYFRHEEGR HALVGERTGE TFRLGDRVEV RLVEAAPVAG
ALRFELLSEG RTRSGGRTAG PGKKAGGRAF KAAPPGRPPG IRNTGSRHRG SRH
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