| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3535 |
|---|
| Symbol | |
|---|
| ID | 6139588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3751332 |
|---|
| End bp | 3753419 |
|---|
| Gene Length | 2088 bp |
|---|
| Protein Length | 695 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641629247 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001756195 |
|---|
| Protein GI | 170749935 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.02065 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGACT CCCTCGCCTT CCTCTCCGGC GGCGGCGAGG CCGCGCGGAT GATCCGCGCG
CGCGACTGGT CGGGTCATCC CCTGGGGCTT CCGGAGACGT GGCCGGCGGA GTTCCGCGCG
GCCCTGTCGC TCGTCCTCAA CTCCCCGGAA TCGATGATCC TGGCCTGGGG GCCCGACCTC
CACTTCTTCT TCAACGACAC CTACTTCCCG CTCCTCGGCC CGCGGTTGCC CTGGGCGATG
GGCGAGCGGT TCGACGTGGT CTGGGCGGAT GCCTGGGATC AGGCCAGGCC GATCATCGAC
GCCGCGCTGG CGGGCCGTCC GGAGCGCTTC GTCGACCTGC CGTGGCAGCT CGACACCGAT
CGGGGCGCCC GCGAGACGTG GTGGACCTTC TCGTACTCGC GGGTTCTCGA TGCCGACGGC
CGGGTCACCG GCCTGTTCAT CCTCACCAAC GAGACCACCG GCCGGGTCCG GGCGGACGCC
GCCCTCAAGG AGAGCCAGGG CCGGCTCGAG GCGGCGCTGG CGGAGCTGCG CGATCTGAAC
GCCACCTTGG CGCAGCAGGT CGAGGAGCGC ACGGCCGACC GCAACGCCCT GTGGACGCTC
TCGTCCGACA TGATGCTGCG CTGCCTGTTC GACGGGACGA TCACCGCGGT GAACCCGGCC
TGGACCGAGG TGCTGGGCTG GCGCCCGGAC GAACTGGTCG GAACCAAGCT CATCGCCCTC
GTCCATCCGG ACGATCTCGA CCGCACCGTC GCGGGCGCGG GCCAGCTCTC CGCGGGGTCG
AGCCTCGCGC GCTTCGACAA CCGCTACCGC CACCGGGACG GCGGCTACCG CTGGATCAGC
TGGGCGGCCC GGCCGGGGGA GGGGATCATC AACGCCGTCG GCCGCGATTT CACCGTGGAG
CGCGAGCGCG CCGACGCCCT GGCCGCGGCC GAGGAGGCCC TGCGGCAGTC GCAGAAGATG
GAGGCCGTCG GCCAGCTGAC CGGCGGCATC GCCCACGACT TCAACAACCT GCTCGCCGGC
ATCTCCGGCT CGCTGGAGCT GATCCAGACC CGCCTCGGCC AGGGCCGCGT CATGGATGTG
GACCGCTACA TCAACGCGGC GCAGGGGGCC TCGAAGCGGG CCGCGGCGCT GACCCACCGG
CTCCTCGCCT TCTCGCGGCG CCAGACCCTC GACCCGAAGC CCACCGACGT GAACCGGCTG
GTGGCCGGCA TGGAGGAGCT GATCCGCCGC ACCGTGGGCC CCGCCGTAAT GGTCGAGGTC
GTGGCGCCGC CCGGCCTCTG GCCGGCCCTG GTCGACCCGC CGCAGCTCGA GAACGCGCTC
CTCAACCTGT GCATCAACGC CCGGGACGCG ATGCCCGAGG GGGGGCGCAT CGCGATCGAG
ACCGCCAATG CCTGGCTCGA CGAGCGCGCC GCCCGGCGCC ACGACATGCC GCCCGGCCAG
TACCTCTCCC TCTGCGTCAC CGACACCGGC ATCGGCATGT CGCCCGAGAT CGTCGGCAAG
GTGTTCGAGC CGTTCTTCAC CACGAAGCCC CTGGGGCAGG GCACCGGCCT CGGCCTGTCG
ATGATCTACG GCTTCGCGCA GCAATCGGGC GGCCAGGTGC GGATCCACTC CGAGGTCGGC
AAGGGCACCA CGGTCTGCCT GTACCTGCCC CGCCATCGCG GCGCGGTCGC CGAGGAGGAC
GCGCACGCCG CCGTCGGCGC GCCGCCGCGG GCCGCGCCGG GCGAGACCGT GCTGGTGGTC
GACGACGAGC CGACCGTCCG CATGCTGGTC ACCGAGGTGC TGGAGGATCT CGGCTACACG
GCGATCGAGG CCGCCGACAG CGCGGCCGGC CTCAGGGTGC TGCAATCCGA CGTGCGCATC
GACCTGCTGG TGTCCGATGT CGGACTGCCG GGCGGCATGA ACGGGCGCCA GATGGCCGAG
GCCGGCCGGG TCACGCGCCC GGGCCTCAAG GTCCTGTTCG TCACCGGCTA CGCCGAGAGC
GCGGTCTTCG GCAACGGGCC GCTCGATGCC GGGATGCAGG TCATCACCAA GCCGTTCGTG
GTGGAGGTGC TGGGCGCCCG CATCCGCGAG ATGATCGGAA CGGCTTGA
|
|---|
| Protein sequence | MTDSLAFLSG GGEAARMIRA RDWSGHPLGL PETWPAEFRA ALSLVLNSPE SMILAWGPDL
HFFFNDTYFP LLGPRLPWAM GERFDVVWAD AWDQARPIID AALAGRPERF VDLPWQLDTD
RGARETWWTF SYSRVLDADG RVTGLFILTN ETTGRVRADA ALKESQGRLE AALAELRDLN
ATLAQQVEER TADRNALWTL SSDMMLRCLF DGTITAVNPA WTEVLGWRPD ELVGTKLIAL
VHPDDLDRTV AGAGQLSAGS SLARFDNRYR HRDGGYRWIS WAARPGEGII NAVGRDFTVE
RERADALAAA EEALRQSQKM EAVGQLTGGI AHDFNNLLAG ISGSLELIQT RLGQGRVMDV
DRYINAAQGA SKRAAALTHR LLAFSRRQTL DPKPTDVNRL VAGMEELIRR TVGPAVMVEV
VAPPGLWPAL VDPPQLENAL LNLCINARDA MPEGGRIAIE TANAWLDERA ARRHDMPPGQ
YLSLCVTDTG IGMSPEIVGK VFEPFFTTKP LGQGTGLGLS MIYGFAQQSG GQVRIHSEVG
KGTTVCLYLP RHRGAVAEED AHAAVGAPPR AAPGETVLVV DDEPTVRMLV TEVLEDLGYT
AIEAADSAAG LRVLQSDVRI DLLVSDVGLP GGMNGRQMAE AGRVTRPGLK VLFVTGYAES
AVFGNGPLDA GMQVITKPFV VEVLGARIRE MIGTA
|
|---|
| |