| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3442 |
|---|
| Symbol | |
|---|
| ID | 6139490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3658436 |
|---|
| End bp | 3659701 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641629149 |
|---|
| Product | secretion protein HlyD family protein |
|---|
| Protein accession | YP_001756102 |
|---|
| Protein GI | 170749842 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.711294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTTC GCGAGGACGC CGATCGGCCG AGTTCCGGTC TCGAGACGGG TATTGAGACC
GGTATTGAGA CCCGAATCGA GGCCGGGGAC GAGGCGCGCG CCGAGCGCAC CGCGCCGGCC
GCCGCCGCGG CGTCCCTGCC GACGCCCGTG CCGGTCGAGG CGCCGCCCGC GCGCAAGCGC
TCCATGAGGC GGCTCGTCCT GCTCGGACTG CTGACGGCCG CCCTGGGCGG CGGCGCGTAT
CAGGGGTGGC AGTGGTGGAC CGTCGGGCGG TTCTTCGTCT CGACCGACGA CGCCTACGTC
CAGGCCGACA TCTCGGTCCT CGCGGCCAAG ATCCCGGGCT ATCTCCAGTC GGTCCCGGTG
GTGAACGGCC TCGCGGTGAG GAAGGGCGAC GTCATCGCCA AGCTCGACGA CGGCGACTAC
CGCCTCGCGC TGCAGGCGGC GCAGGACAAG CTCGCCACCC AGGAGAGCAC GATCGCGCGG
ATCGGCCGGC AGGCCGAGGC GGCGCAGGCC CAGGTCGCCC AGGCCGCCGC GCAGCTCGAC
GCGACCCGCG CCGACGCCGT CCGCGCCCAG GCCGACTTCG CCCGGTCGAC GCAGATGCAG
GCGGATTACG TGGCCAAGTC GCGCATCGAC CAGACCCGCG CCGACCGCGA CCGCACCGAG
GCCTCCGTGA AGGCCATGGA GGCGGGCCTC CTCGCGGCCC GCGCCAACGT GGACGTGCTC
CAGGCGCAGA AGCGCGAGGC GGAGAGCCTC GCGGCGGAGC TGCGCACCGC CGTCGACCGG
GCCCGGCGCG ACCTCGACTT CACGGTCATC CGCGCGCCCT TCGACGGTGT GGTCGGCAAC
AAGGCCGTCG AGGCCGGCGC CTATGTCGGG CCCGGCACGC GGGTCGCCGC GCTGGTCCCG
CTCCAGAGCG TCCGGATCGA CGCGAACTTC AAGGAGACCC AGGTCGAGCG CATGCGTCCC
GGACAGCCGG TGACCGTGAC GGTCGACGCC TATCCGGACC GTGAGATCCA CGCCGTGGTG
GAATCGTTCT CGCCGGCCTC CGGCTCGGTC TTCAGCCTGC TGCCGCCCGA CAACGCCACC
GGCAACTTCA CCAAGATCGT CCAGCGCCTG CCGGTCCGGG TGCGCGTGCC CGAGGAGGTC
GCCCGGGAGG GCCTGCTGCG GCCGGGCCTG TCGGCGGTGG TGCGGGTCGA CACCCGCACC
GGCGCGGACC GCTCCGTCCT CGACCGCGCC TCCGCGCCGC GGCCGGTCAG CACCGCGAGC
CGCTGA
|
|---|
| Protein sequence | MSLREDADRP SSGLETGIET GIETRIEAGD EARAERTAPA AAAASLPTPV PVEAPPARKR
SMRRLVLLGL LTAALGGGAY QGWQWWTVGR FFVSTDDAYV QADISVLAAK IPGYLQSVPV
VNGLAVRKGD VIAKLDDGDY RLALQAAQDK LATQESTIAR IGRQAEAAQA QVAQAAAQLD
ATRADAVRAQ ADFARSTQMQ ADYVAKSRID QTRADRDRTE ASVKAMEAGL LAARANVDVL
QAQKREAESL AAELRTAVDR ARRDLDFTVI RAPFDGVVGN KAVEAGAYVG PGTRVAALVP
LQSVRIDANF KETQVERMRP GQPVTVTVDA YPDREIHAVV ESFSPASGSV FSLLPPDNAT
GNFTKIVQRL PVRVRVPEEV AREGLLRPGL SAVVRVDTRT GADRSVLDRA SAPRPVSTAS
R
|
|---|
| |