Gene Mrad2831_3409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3409 
Symbol 
ID6139457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3619601 
End bp3620689 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content73% 
IMG OID641629117 
ProductLacI family transcription regulator 
Protein accessionYP_001756070 
Protein GI170749810 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000197592 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCGTCG GGCCGCTCGG GGGTGGGGGA TCGATCTCAG TGCTGGACCT GCCGGAAGAG 
ATCCTCGAGC CGCCGACGCG CGGCCCGGTT GCCCGGGACG TCGCCCGCCG CGCCGGCGTC
TCGACCGCGA CGGTCTCCCG GGTTCTCAAC GGCTCCGCCG GGGTCCGGGC CGACAAGCGC
GAGGCGGTGA TGCGGGCCGC GCAGGATCTC GGCTTCGTCG CCAACGGCGC GGCCCGGGCG
CTCTCCACGC GACGGTTCAT GGCGGTCGGC GCGGTCGTGC CGAACATCGA GAACGAGGCC
TTCGTGCGCG TCCTGTCGAG CTTCCAGGAC CGGCTGCGGC AGGCGGGTTA CACCCTGGTC
GCGGCCAATG CCGGCTACGA CCTGGAGGAC GAGCTCCGCG AGGCGACGTT CCTGCTGGAG
CGGGGCGTCG ACGGGCTGAT GCTGGTCGGC GACATCCACC ACCCGGATCT CCACGCCCGG
ATCGCCCGCG CCGGCATCCC GATGGTCCAG ACCTTCAGCC TGTCCCGCGA GCGGCCCTGC
GTGGGCTTCG ACAACGCCGC CTCGGCGGCC CGGGCGGCCA ACTACCTGAT GGACCTCGGT
CACCGCCGGA TCGGGGTGAT CTCGGGTCTG CGCAAGGACA ACGATCGCGG CGGCGCCCGG
GTCACGGGCA TCGCGGCGGC GCTCGCGGCC CGGGGCCTGC GGCTCGCCCC GGAGCACGAC
ATCGAGATCT CCTACGGGAT CGGCGGCGGC CGCGACGGGT TTCGCCAGAT GCTGGCGGGC
GGACCGCCGC CGACCGCGAT CATCTGCGGC ACCGATCAGA TCGCCTTCGG GGCGATGATC
GAGGCGCGGG CCCGCGGGCT CTCCGTCCCC GGGGACCTGT CGGTGATCGG CCACAACGAT
TCCGACTTCG CGCCCTTCCT GGACCCGGCG CTGACGACGA TCCGCATCCA CTCCGCCGAG
ATCGGCCACG CCGCCGGCGA CCACCTGATC GCCCGGATCC AGGGGCGGCC GATGGTCCGC
CTCACCGAGA TCGACGCCGA ACTGATCCTG CGCGCCAGCA CGGCCCCGCC GAGGCGTACC
GGCGCCTGA
 
Protein sequence
MPVGPLGGGG SISVLDLPEE ILEPPTRGPV ARDVARRAGV STATVSRVLN GSAGVRADKR 
EAVMRAAQDL GFVANGAARA LSTRRFMAVG AVVPNIENEA FVRVLSSFQD RLRQAGYTLV
AANAGYDLED ELREATFLLE RGVDGLMLVG DIHHPDLHAR IARAGIPMVQ TFSLSRERPC
VGFDNAASAA RAANYLMDLG HRRIGVISGL RKDNDRGGAR VTGIAAALAA RGLRLAPEHD
IEISYGIGGG RDGFRQMLAG GPPPTAIICG TDQIAFGAMI EARARGLSVP GDLSVIGHND
SDFAPFLDPA LTTIRIHSAE IGHAAGDHLI ARIQGRPMVR LTEIDAELIL RASTAPPRRT
GA